RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 FAM157AC9JC47 383 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 TSTD3H0UI37 97 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 TCAPO15273 167 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 IL2RAP01589 272 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 ERGP11308 486 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 ZIC1Q15915 447 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 GUK1Q16774 197 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 RTL10Q7L3V2 364 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 DPPA2Q7Z7J5 298 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 ZNF595Q8IYB9 648 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 MCHR2Q969V1 340 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 CPNE4Q96A23 557 aaPredicted RBP13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 CKLFQ9UBR5 152 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 ZNF726A6NNF4 738 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 ABHD16AO95870 558 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 TXNDC12O95881 172 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 AK1P00568 194 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 DRD3P35462 400 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 NPY4RP50391 375 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 CTXN1P60606 82 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 NNATQ16517 81 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 AWAT2Q6E213 333 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 LINC00615Q96LM1 132 aaPredicted RBP13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 TMEM74BQ9NUR3 256 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 DHDHQ9UQ10 334 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 WDFY4Q6ZS81 3184 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 DBX1A6NMT0 343 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 ZNF354AO60765 605 aaPredicted RBP13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 CPMP14384 443 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 HIST1H1BP16401 226 aaKnown RBP13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 G0S2P27469 103 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 ARRB1P49407 418 aaPredicted RBP13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 RAP1AP62834 184 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 SPNS3Q6ZMD2 512 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 OR1J1Q8NGS3 322 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 NMES1Q9C002 83 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 SLCO5A1Q9H2Y9 848 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 ELOVL3Q9HB03 270 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 KCNJ16Q9NPI9 418 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 POLE3Q9NRF9 147 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 PARPBPQ9NWS1 579 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 WASF3Q9UPY6 502 aa13.19□□□□□ -0.3
NCKIPSD-204ENST00000416649 CX3CR1P49238 355 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 FHITP49789 147 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 SULT1A2P50226 295 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 EIF5AP63241 154 aaKnown RBP13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 HMGN3Q15651 99 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 PRSS54Q6PEW0 395 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 SLC25A44Q96H78 314 aaPredicted RBP13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 C4orf45Q96LM5 186 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 NMNAT2Q9BZQ4 307 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 SLC5A7Q9GZV3 580 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 UNKLQ9H9P5 680 aaKnown RBP13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 PLA2G2EQ9NZK7 142 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 CLEC1BQ9P126 229 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 FRYLO94915 3013 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 ZNF727A8MUV8 499 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 APODP05090 189 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 RAB28P51157 221 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 CST6Q15828 149 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 ZNF239Q16600 458 aaKnown RBP13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 MEP1BQ16820 701 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 TMEM225Q6GV28 225 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 GKN2Q86XP6 184 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 OR10C1Q96KK4 312 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 DCBLD2Q96PD2 775 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 TRIM2Q9C040 744 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 PDE7BQ9NP56 450 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 CA14Q9ULX7 337 aa13.18□□□□□ -0.3
NCKIPSD-204ENST00000416649 PRH1P02810 166 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 FABP4P15090 132 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 RPS4Y1P22090 263 aaKnown RBP13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 PMELP40967 661 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 ACAA2P42765 397 aaKnown RBP13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 SPCS3P61009 180 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 TFF2Q03403 129 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 RASGEF1BQ0VAM2 473 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 FAM53BQ14153 422 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 MLF2Q15773 248 aaPredicted RBP13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 ITPRIPL2Q3MIP1 535 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 FCRL6Q6DN72 434 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 ASPHD2Q6ICH7 369 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 ADGRE4PQ86SQ3 457 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 RTN4RL2Q86UN3 420 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 ZNF679Q8IYX0 411 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 SLC43A2Q8N370 569 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 ZDHHC22Q8N966 263 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 OR4N2Q8NGD1 307 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 TUBA4BQ9H853 241 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 SPAG17Q6Q759 2223 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 TRBV6-7A0A0A0MS04 114 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 SOX1O00570 391 aaPredicted RBP13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 F10P00742 488 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 CSTBP04080 98 aaKnown RBP13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 METRNLQ641Q3 311 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 LCN10Q6JVE6 187 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 ZNF343Q6P1L6 599 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 ULK3Q6PHR2 472 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 GATSQ8NAP1 163 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 MR1Q95460 341 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms