RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 FAM96BQ9Y3D0 163 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 XRCC2O43543 280 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 MT-ND4LP03901 98 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 HTRA4P83105 476 aaPredicted RBP11.69□□□□□ -0.54
SCN1B-202ENST00000415950 RPL18Q07020 188 aaKnown RBP11.69□□□□□ -0.54
SCN1B-202ENST00000415950 ACKR1Q16570 336 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 RNF151Q2KHN1 245 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 SLC37A2Q8TED4 501 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 UHRF2Q96PU4 802 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 GAREM1Q9H706 876 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 SERGEFQ9UGK8 458 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 PIGLQ9Y2B2 252 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 COL4A5P29400 1685 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 KCNAB3O43448 404 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 ABOP16442 354 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 ACKR3P25106 362 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 FCGR2CP31995 323 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 PCBD1P61457 104 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 C17orf67Q0P5P2 114 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 HMGN3Q15651 99 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 OR2B11Q5JQS5 317 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 NAA40Q86UY6 237 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 OR11H4Q8NGC9 324 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 MITD1Q8WV92 249 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 TCTN2Q96GX1 697 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 MED29Q9NX70 200 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 SLCO1C1Q9NYB5 712 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 PISDQ9UG56 409 aa11.69□□□□□ -0.54
SCN1B-202ENST00000415950 OR6C68A6NDL8 312 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 SIGLEC6O43699 453 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 TBXA2RP21731 343 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 CATR1Q13166 79 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 EDDM3AQ14507 147 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 TAF9Q16594 264 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 ADAMTSL4Q6UY14 1074 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 PRSS35Q8N3Z0 413 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 SLC6A18Q96N87 628 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 ADAT1Q9BUB4 502 aaKnown RBP11.68□□□□□ -0.54
SCN1B-202ENST00000415950 MAGT1Q9H0U3 335 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 CTSFQ9UBX1 484 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 ZNF831Q5JPB2 1677 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 CENPVL1A0A0U1RR11 272 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 H7BYZ3 331 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 GPR31O00270 319 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 ST6GAL1P15907 406 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 NKX2-1P43699 371 aaPredicted RBP11.68□□□□□ -0.54
SCN1B-202ENST00000415950 RPP30P78346 268 aaKnown RBP11.68□□□□□ -0.54
SCN1B-202ENST00000415950 PRSS53Q2L4Q9 553 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 DCBLD2Q96PD2 775 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 ZBP1Q9H171 429 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 GPR173Q9NS66 373 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 OR5V1Q9UGF6 321 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 KPTNQ9Y664 436 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 TRAV20A0A0B4J274 112 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 METTL12A8MUP2 240 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 PPP5D1E7EU14 171 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 NRG2O14511 850 aaPredicted RBP11.68□□□□□ -0.54
SCN1B-202ENST00000415950 ZIC2O95409 532 aaPredicted RBP11.68□□□□□ -0.54
SCN1B-202ENST00000415950 CHRM2P08172 466 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 HLA-DOBP13765 273 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 HRH1P35367 487 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 PLAC9Q5JTB6 97 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 BAP18Q8IXM2 172 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 MORN4Q8NDC4 146 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 OR5M8Q8NGP6 311 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 OR13C8Q8NGS7 320 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 WNT2BQ93097 391 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 C10orf90Q96M02 699 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 ZNF2Q9BSG1 426 aaPredicted RBP11.68□□□□□ -0.54
SCN1B-202ENST00000415950 PCDHB10Q9UN67 800 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 KIF13BQ9NQT8 1826 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 A0A1W2PNR3 127 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 WDR1O75083 606 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 NXPH2O95156 264 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 TMIGD3P0DMS9 266 aaPredicted RBP11.68□□□□□ -0.54
SCN1B-202ENST00000415950 PCBP4P57723 403 aaKnown RBP11.68□□□□□ -0.54
SCN1B-202ENST00000415950 GLDNQ6ZMI3 551 aaPredicted RBP11.68□□□□□ -0.54
SCN1B-202ENST00000415950 EID2Q8N6I1 236 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 OR13H1Q8NG92 308 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 SLC46A1Q96NT5 459 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 EXOSC3Q9NQT5 275 aaKnown RBP11.68□□□□□ -0.54
SCN1B-202ENST00000415950 CD207Q9UJ71 328 aa11.68□□□□□ -0.54
SCN1B-202ENST00000415950 TMEM200CA6NKL6 621 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 HS3ST1O14792 307 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 OR2F2O95006 317 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 EDDM3BP56851 147 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 FLI1Q01543 452 aaPredicted RBP11.67□□□□□ -0.54
SCN1B-202ENST00000415950 DUSP2Q05923 314 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 OR2F1Q13607 317 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 LINC00696Q6ZRV3 163 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 C16orf52Q8NHV5 167 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 RPUSD4Q96CM3 377 aaKnown RBP11.67□□□□□ -0.54
SCN1B-202ENST00000415950 SIGLEC11Q96RL6 698 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 MED9Q9NWA0 146 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 PRR13Q9NZ81 148 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 SLC5A6Q9Y289 635 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 LAMB2P55268 1798 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 A0A0A6YYD5 115 aa11.67□□□□□ -0.54
SCN1B-202ENST00000415950 RPL27P61353 136 aaKnown RBP11.67□□□□□ -0.54
SCN1B-202ENST00000415950 TMPRSS7Q7RTY8 843 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms