RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 MOB1AQ9H8S9 216 aa13.14□□□□□ -0.31
USP4-203ENST00000415188 NPDC1Q9NQX5 325 aaPredicted RBP13.14□□□□□ -0.31
USP4-203ENST00000415188 P4HTMQ9NXG6 502 aa13.14□□□□□ -0.31
USP4-203ENST00000415188 NKIRAS2Q9NYR9 191 aa13.14□□□□□ -0.31
USP4-203ENST00000415188 MRPL15Q9P015 296 aaKnown RBP13.14□□□□□ -0.31
USP4-203ENST00000415188 TMEM272A0A1B0GTI8 110 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 LOC107986453A0A1B0GWG9 222 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 LOC390937A0A1W2PQ73 354 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 H0YC42 278 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 AKR7A2O43488 359 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 CREBL2O60519 120 aaPredicted RBP13.13□□□□□ -0.31
USP4-203ENST00000415188 ALDOBP05062 364 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 TPOP07202 933 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 CXCL3P19876 107 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 RAB6AP20340 208 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 GNLYP22749 145 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 HTR2CP28335 458 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 PRSS3P35030 304 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 VEGFCP49767 419 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 GNG2P59768 71 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 GALK2Q01415 458 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 IKZF1Q13422 519 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 PCGF3Q3KNV8 242 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 DCAF10Q5QP82 559 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 JMJD6Q6NYC1 403 aaPredicted RBP13.13□□□□□ -0.31
USP4-203ENST00000415188 KLHL24Q6TFL4 600 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 NHLRC1Q6VVB1 395 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 RHOUQ7L0Q8 258 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 ADGRE4PQ86SQ3 457 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.13□□□□□ -0.31
USP4-203ENST00000415188 CDH26Q8IXH8 852 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 FADS6Q8N9I5 356 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 Q8NA96 180 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 OR1J4Q8NGS1 313 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 POC1BQ8TC44 478 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 GCDHQ92947 438 aaPredicted RBP13.13□□□□□ -0.31
USP4-203ENST00000415188 SLC25A44Q96H78 314 aaPredicted RBP13.13□□□□□ -0.31
USP4-203ENST00000415188 MRPL13Q9BYD1 178 aaKnown RBP13.13□□□□□ -0.31
USP4-203ENST00000415188 OR10A4Q9H209 315 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 TAS2R4Q9NYW5 299 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 EMC9Q9Y3B6 208 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 HDGFL3Q9Y3E1 203 aa13.13□□□□□ -0.31
USP4-203ENST00000415188 LOC102725191A0A1B0GVB3 256 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 C2orf72A6NCS6 295 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 OR2J2O76002 312 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 IGHG1P01857 330 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 HPXP02790 462 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 GIPP09681 153 aaPredicted RBP13.12□□□□□ -0.31
USP4-203ENST00000415188 TMIGD3P0DMS9 266 aaPredicted RBP13.12□□□□□ -0.31
USP4-203ENST00000415188 NR2C1P13056 603 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 C4BPBP20851 252 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 DNASE1P24855 282 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 LAP3P28838 519 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 BIDP55957 195 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 FMODQ06828 376 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 MYBPHQ13203 477 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 CAMK2DQ13557 499 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 ZNF626Q68DY1 528 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 ASPHD2Q6ICH7 369 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 SLC25A25Q6KCM7 469 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 KDM8Q8N371 416 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 NOXO1Q8NFA2 376 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 OR10G3Q8NGC4 313 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 ELP5Q8TE02 316 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 GPX8Q8TED1 209 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 IP6K3Q96PC2 410 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 NPAS1Q99742 590 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 PTGES2Q9H7Z7 377 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 B3GNT2Q9NY97 397 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 B3GAT1Q9P2W7 334 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 MAST4O15021 2626 aa13.12□□□□□ -0.31
USP4-203ENST00000415188 USP9XQ93008 2570 aaPredicted RBP13.11□□□□□ -0.31
USP4-203ENST00000415188 TRAV18A0A075B6X5 111 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 TMEM269A0A1B0GVZ9 245 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 MPZL1O95297 269 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 WNT11O96014 354 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 MELTFP08582 738 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 HSD11B1P28845 292 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 HTR2BP41595 481 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 ZP1P60852 638 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 SNRPD2P62316 118 aaKnown RBP13.11□□□□□ -0.31
USP4-203ENST00000415188 DHODHQ02127 395 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 INPP5JQ15735 1006 aaPredicted RBP13.11□□□□□ -0.31
USP4-203ENST00000415188 EXT1Q16394 746 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 GALNT16Q8N428 558 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 CLEC1AQ8NC01 280 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 OR4K17Q8NGC6 315 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 OR6N1Q8NGY5 312 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 ASB13Q8WXK3 278 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 C11orf40Q8WZ69 217 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 SNAPC3Q92966 411 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 ZBTB8AQ96BR9 441 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 FER1L6-AS2Q96M78 137 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 OXGR1Q96P68 337 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 RASL10BQ96S79 203 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 ATG5Q9H1Y0 275 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 C1orf198Q9H425 327 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 CYB5R1Q9UHQ9 305 aa13.11□□□□□ -0.31
USP4-203ENST00000415188 ELF5Q9UKW6 265 aaPredicted RBP13.11□□□□□ -0.31
USP4-203ENST00000415188 FLVCR2Q9UPI3 526 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms