RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 MAOBP27338 520 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 DLSTP36957 453 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 OR1D4P47884 311 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 GPR85P60893 370 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 IL13RA1P78552 427 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 QRFPP83859 136 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 PPP1R1AQ13522 171 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 SNTB1Q13884 538 aaKnown RBP8.73□□□□□ -1.01
CD44-206ENST00000415148 PLEKHN1Q494U1 663 aaPredicted RBP8.73□□□□□ -1.01
CD44-206ENST00000415148 TRAPPC6BQ86SZ2 158 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 SLC22A24Q8N4F4 322 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 ADAD2Q8NCV1 583 aaKnown RBP8.73□□□□□ -1.01
CD44-206ENST00000415148 RNF133Q8WVZ7 376 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 ROBO4Q8WZ75 1007 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 NKD1Q969G9 470 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 KCNK17Q96T54 332 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 NRSN2Q9GZP1 204 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 CST11Q9H112 138 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 CNTD2Q9H8S5 307 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 PRR13Q9NZ81 148 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 PISDQ9UG56 409 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 MKL2Q9ULH7 1088 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 CDC14CA4D256 554 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 NUDT19A8MXV4 375 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 DUS4LO95620 317 aaKnown RBP8.73□□□□□ -1.01
CD44-206ENST00000415148 NME1P15531 152 aaKnown RBP8.73□□□□□ -1.01
CD44-206ENST00000415148 CASRP41180 1078 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 APOBEC1P41238 236 aaKnown RBP8.73□□□□□ -1.01
CD44-206ENST00000415148 GFERP55789 205 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 TAS2R31P59538 309 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 CYCSP99999 105 aaKnown RBP8.73□□□□□ -1.01
CD44-206ENST00000415148 FLI1Q01543 452 aaPredicted RBP8.73□□□□□ -1.01
CD44-206ENST00000415148 INPP5JQ15735 1006 aaPredicted RBP8.73□□□□□ -1.01
CD44-206ENST00000415148 OGFOD3Q6PK18 319 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 H1FNTQ75WM6 255 aaPredicted RBP8.73□□□□□ -1.01
CD44-206ENST00000415148 RNF144BQ7Z419 303 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 WDFY1Q8IWB7 410 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 PAQR4Q8N4S7 273 aaPredicted RBP8.73□□□□□ -1.01
CD44-206ENST00000415148 INO80EQ8NBZ0 244 aaPredicted RBP8.73□□□□□ -1.01
CD44-206ENST00000415148 ACBD4Q8NC06 268 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 ST8SIA1Q92185 356 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 CDC6Q99741 560 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 USB1Q9BQ65 265 aaKnown RBP8.73□□□□□ -1.01
CD44-206ENST00000415148 NKX2-4Q9H2Z4 354 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 FN3KRPQ9HA64 309 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 FANCFQ9NPI8 374 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 SLC39A1Q9NY26 324 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 SLC5A6Q9Y289 635 aa8.73□□□□□ -1.01
CD44-206ENST00000415148 TMEM218A2RU14 115 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 DBX1A6NMT0 343 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 NPIPA5E9PKD4 350 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 EFSO43281 561 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 STK17BO94768 372 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 ERCC1P07992 297 aaPredicted RBP8.72□□□□□ -1.01
CD44-206ENST00000415148 CHRM2P08172 466 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 PRKXP51817 358 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 NSDHLQ15738 373 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 CCDC157Q569K6 752 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 PRAMEF17Q5VTA0 474 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 ZNF529Q6P280 563 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 TMEM71Q6P5X7 295 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 OR1M1Q8NGA1 313 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 OR5D14Q8NGL3 314 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 STOML3Q8TAV4 291 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 C2CD4CQ8TF44 421 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 FGGYQ96C11 551 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 TSNAXQ99598 290 aaKnown RBP8.72□□□□□ -1.01
CD44-206ENST00000415148 NMES1Q9C002 83 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 ZNF304Q9HCX3 659 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 MBD2Q9UBB5 411 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 NPIPA1Q9UND3 350 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 ANKUB1A6NFN9 424 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 EEF1E1-BLOC1S5C9J1V9 151 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 F8VVB4 439 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 F8VWA3 439 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 P2RY10O00398 339 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 H2AFB1P0C5Y9 115 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 FBLP22087 321 aaKnown RBP8.72□□□□□ -1.01
CD44-206ENST00000415148 NFYBP25208 207 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 NPBWR1P48145 328 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 CX3CR1P49238 355 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 SUMO3P55854 103 aaPredicted RBP8.72□□□□□ -1.01
CD44-206ENST00000415148 HSD11B2P80365 405 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 NAAAQ02083 359 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 FAM189A2Q15884 450 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 PNLIPRP3Q17RR3 467 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 KLHL24Q6TFL4 600 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 ZFP82Q8N141 532 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 ELP5Q8TE02 316 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 LMX1AQ8TE12 382 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 CASTOR1Q8WTX7 329 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.72□□□□□ -1.01
CD44-206ENST00000415148 RRNAD1Q96FB5 475 aaKnown RBP8.72□□□□□ -1.01
CD44-206ENST00000415148 OR11A1Q9GZK7 315 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 TLNRD1Q9H1K6 362 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 FAM206AQ9NX38 181 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 THADAQ6YHU6 1953 aa8.72□□□□□ -1.01
CD44-206ENST00000415148 PRUNE2Q8WUY3 3088 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 TRBV6-7A0A0A0MS04 114 aa8.71□□□□□ -1.01
CD44-206ENST00000415148 ADAM10O14672 748 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms