RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 OR2G2Q8NGZ5 317 aa11.48□□□□□ -0.57
CNN3-203ENST00000415017 SPSB4Q96A44 273 aa11.48□□□□□ -0.57
CNN3-203ENST00000415017 C4orf45Q96LM5 186 aa11.48□□□□□ -0.57
CNN3-203ENST00000415017 OPALINQ96PE5 141 aa11.48□□□□□ -0.57
CNN3-203ENST00000415017 MGLLQ99685 303 aa11.48□□□□□ -0.57
CNN3-203ENST00000415017 SPOCK3Q9BQ16 436 aa11.48□□□□□ -0.57
CNN3-203ENST00000415017 TMEM204Q9BSN7 226 aa11.48□□□□□ -0.57
CNN3-203ENST00000415017 MED18Q9BUE0 208 aa11.48□□□□□ -0.57
CNN3-203ENST00000415017 C1QTNF6Q9BXI9 259 aa11.48□□□□□ -0.57
CNN3-203ENST00000415017 NGBQ9NPG2 151 aa11.48□□□□□ -0.57
CNN3-203ENST00000415017 FRRS1LQ9P0K9 344 aa11.48□□□□□ -0.57
CNN3-203ENST00000415017 RAI1Q7Z5J4 1906 aaPredicted RBP11.48□□□□□ -0.57
CNN3-203ENST00000415017 ICE1Q9Y2F5 2266 aa11.48□□□□□ -0.57
CNN3-203ENST00000415017 ABCA4P78363 2273 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 A0A0U1RQV5 110 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 TMEM269A0A1B0GVZ9 245 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 FAM221AA4D161 298 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 C5orf49A4QMS7 147 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 C5orf63A6NC05 138 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 F5H5K5 113 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 INMTO95050 263 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 CLDN1O95832 211 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 TTRP02766 147 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 ISG15P05161 165 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 CCL2P13500 99 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 CPEP16870 476 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 CD53P19397 219 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 CCL1P22362 96 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 TUBG1P23258 451 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 HSD11B1P28845 292 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 PSMB10P40306 273 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 CX3CR1P49238 355 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 GTF2A1P52655 376 aaPredicted RBP11.47□□□□□ -0.57
CNN3-203ENST00000415017 GBX2P52951 348 aaPredicted RBP11.47□□□□□ -0.57
CNN3-203ENST00000415017 ZNF121P58317 390 aaPredicted RBP11.47□□□□□ -0.57
CNN3-203ENST00000415017 TAS2R43P59537 309 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 GALK2Q01415 458 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 ALKBH1Q13686 389 aaKnown RBP11.47□□□□□ -0.57
CNN3-203ENST00000415017 CDK5R1Q15078 307 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 ZNF829Q3KNS6 432 aaPredicted RBP11.47□□□□□ -0.57
CNN3-203ENST00000415017 WDR38Q5JTN6 314 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 TMEM108Q6UXF1 575 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 KRT74Q7RTS7 529 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 FAM220AQ7Z4H9 259 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 C1orf174Q8IYL3 243 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 ZNF101Q8IZC7 436 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 OR52H1Q8NGJ2 320 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 FAM222BQ8WU58 562 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 ITFG2Q969R8 447 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 PGLYRP3Q96LB9 341 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 TRIM36Q9NQ86 728 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 TUBG2Q9NRH3 451 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 CRIM1Q9NZV1 1036 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 SF3B6Q9Y3B4 125 aaKnown RBP11.47□□□□□ -0.57
CNN3-203ENST00000415017 GRIP1Q9Y3R0 1128 aa11.47□□□□□ -0.57
CNN3-203ENST00000415017 FASNP49327 2511 aaKnown RBP11.46□□□□□ -0.57
CNN3-203ENST00000415017 PKDREJQ9NTG1 2253 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 A0A1B0GTI1 187 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 M0R1B8 84 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 SMPD2O60906 423 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 GOSR1O95249 250 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 CLPTM1O96005 669 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 NGFP01138 241 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 NR4A1P22736 598 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 BSPH1Q075Z2 132 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 SNTB1Q13884 538 aaKnown RBP11.46□□□□□ -0.57
CNN3-203ENST00000415017 MED22Q15528 200 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 TAF13Q15543 124 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 SNAI3Q3KNW1 292 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 BEX5Q5H9J7 111 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 WFDC8Q8IUA0 241 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 ZNF283Q8N7M2 679 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 OR8B12Q8NGG6 310 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 PPP1R14AQ96A00 147 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 APOBEC3DQ96AK3 386 aaPredicted RBP11.46□□□□□ -0.57
CNN3-203ENST00000415017 SMIM19Q96E16 107 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 PBOV1Q9GZY1 135 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 SP140LQ9H930 580 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 OR52A1Q9UKL2 312 aa11.46□□□□□ -0.57
CNN3-203ENST00000415017 ROS1P08922 2347 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.45□□□□□ -0.58
CNN3-203ENST00000415017 LOC110117498-PIK3R3F6TDL0 507 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 SC5DO75845 299 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 RPP14O95059 124 aaKnown RBP11.45□□□□□ -0.58
CNN3-203ENST00000415017 ZFPL1O95159 310 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 CRYAAP02489 173 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 ATP6V1B1P15313 513 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 TGFBR2P37173 567 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 KIR2DL3P43628 341 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 NR1H2P55055 460 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 UCP2P55851 309 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 RPS11P62280 158 aaKnown RBP eCLIP11.45□□□□□ -0.58
CNN3-203ENST00000415017 SSX1Q16384 188 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 TIGD6Q17RP2 521 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 CD200R1LQ6Q8B3 271 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 RFPL4BQ6ZWI9 263 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 PHC2Q8IXK0 858 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 NUP37Q8NFH4 326 aa11.45□□□□□ -0.58
CNN3-203ENST00000415017 RGP1Q92546 391 aaPredicted RBP11.45□□□□□ -0.58
CNN3-203ENST00000415017 SGK3Q96BR1 496 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms