RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 NUFIP2Q7Z417 695 aaKnown RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 APLFQ8IW19 511 aaPredicted RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 ZBED8Q8IZ13 594 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 GABRG1Q8N1C3 465 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 METTL4Q8N3J2 472 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 C2orf73Q8N5S3 287 aaPredicted RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 HSD17B11Q8NBQ5 300 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 OR4F6Q8NGB9 312 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 OR10G8Q8NGN5 311 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 OR2L8Q8NGY9 312 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 PDCD6IPQ8WUM4 868 aaKnown RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 EEF1AKMT3Q96AZ1 226 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 ART5Q96L15 291 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 COL21A1Q96P44 957 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 IL22Q9GZX6 179 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 WDR54Q9H977 334 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 FKRPQ9H9S5 495 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 NT5MQ9NPB1 228 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 TREM2Q9NZC2 230 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 PURGQ9UJV8 347 aaKnown RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 SNX24Q9Y343 169 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 APC2O95996 2303 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 FRYQ5TBA9 3013 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 SDK2Q58EX2 2172 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 PPIAL4EA0A075B759 164 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 hCG_1818297A0A087WSY0 165 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 SERPINE3A8MV23 424 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 I3L4J1 428 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 SNAI2O43623 268 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 CST8O60676 142 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 HBQ1P09105 142 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 GIMD1P0DJR0 217 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 PPIAL4FP0DN26 164 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 MYL2P10916 166 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 DAOP14920 347 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 SERPINA2P20848 420 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 KDELR1P24390 212 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 BTCP35070 178 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 CDKN2BP42772 138 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 DSTNP60981 165 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 SLC25A11Q02978 314 aaKnown RBP2.09□□□□□ -2.08
MCF2-204ENST00000414978 ZNF85Q03923 595 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 SLC10A7Q0GE19 358 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 TFDP2Q14188 446 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 PDK2Q15119 407 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 TRIP13Q15645 432 aaPredicted RBP2.09□□□□□ -2.08
MCF2-204ENST00000414978 CD226Q15762 336 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 CCDC14Q49A88 953 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 TIMM23BQ5SRD1 257 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 WDR25Q64LD2 544 aaPredicted RBP2.09□□□□□ -2.08
MCF2-204ENST00000414978 LEMD1Q68G75 181 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 REP15Q6BDI9 236 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 MMAAQ8IVH4 418 aaKnown RBP2.09□□□□□ -2.08
MCF2-204ENST00000414978 CDRT4Q8N9R6 151 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 OR4D10Q8NGI6 311 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 FAM172AQ8WUF8 416 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 HAUS1Q96CS2 278 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 SMARCD1Q96GM5 515 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 SNF8Q96H20 258 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 OXGR1Q96P68 337 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 ATF6BQ99941 703 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 FOXC2Q99958 501 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 DDA1Q9BW61 102 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 TM2D1Q9BX74 207 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 WDR55Q9H6Y2 383 aaPredicted RBP2.09□□□□□ -2.08
MCF2-204ENST00000414978 RSPH14Q9UHP6 348 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 RNF6Q9Y252 685 aa2.09□□□□□ -2.08
MCF2-204ENST00000414978 TSSC4Q9Y5U2 329 aaPredicted RBP2.09□□□□□ -2.08
MCF2-204ENST00000414978 BPTFQ12830 3046 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 ARID1BQ8NFD5 2236 aaPredicted RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 A0A0A6YYD4 124 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 GOLGA8KD6RF30 607 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 RNASEK-C17orf49H0YIS7 233 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 SAP18O00422 153 aaKnown RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 PHF1O43189 567 aaPredicted RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 IGHV4-34P06331 123 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 SLC35E2BP0CK96 405 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 SLC35E2P0CK97 266 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 NR2C1P13056 603 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 FCGR2CP31995 323 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 HSPA9P38646 679 aaKnown RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 ATP6V0D1P61421 351 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 SKP1P63208 163 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 KCNJ2P63252 427 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 CDKL1Q00532 357 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 POU3F1Q03052 451 aaPredicted RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 CAV1Q03135 178 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 IFFO1Q0D2I5 559 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 TRAF2Q12933 501 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 DUSP7Q16829 419 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 KCTD19Q17RG1 926 aaPredicted RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 RGS21Q2M5E4 152 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 RPEL1Q2QD12 228 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 GPRC6AQ5T6X5 926 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 GPR107Q5VW38 600 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 CLEC20AQ6ZU45 233 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 FOXL2NBQ6ZUU3 175 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 TRMT10CQ7L0Y3 403 aaKnown RBP2.08□□□□□ -2.08
MCF2-204ENST00000414978 MARCH9Q86YJ5 346 aa2.08□□□□□ -2.08
MCF2-204ENST00000414978 CLDN19Q8N6F1 224 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms