RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 OR6N2Q8NGY6 317 aa13.66□□□□□ -0.22
SHMT2-202ENST00000414700 MBD3L2Q8NHZ7 208 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-202ENST00000414700 APH1AQ96BI3 265 aa13.66□□□□□ -0.22
SHMT2-202ENST00000414700 SORCS2Q96PQ0 1159 aa13.66□□□□□ -0.22
SHMT2-202ENST00000414700 ZC4H2Q9NQZ6 224 aa13.66□□□□□ -0.22
SHMT2-202ENST00000414700 PRSS50Q9UI38 385 aa13.66□□□□□ -0.22
SHMT2-202ENST00000414700 ZNF835Q9Y2P0 537 aa13.66□□□□□ -0.22
SHMT2-202ENST00000414700 KLHDC2Q9Y2U9 406 aa13.66□□□□□ -0.22
SHMT2-202ENST00000414700 PRR32B1ATL7 298 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 PRRG2O14669 202 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 DHHO43323 396 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 EDN3P14138 238 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 ZNF133P52736 654 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-202ENST00000414700 ADAM8P78325 824 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 C10orf128Q5T292 105 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 C9orf135Q5VTT2 229 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 SLC35F2Q8IXU6 374 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 GPR137CQ8N3F9 429 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 CNEP1R1Q8N9A8 125 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 POMGNT2Q8NAT1 580 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 INTS14Q96SY0 518 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 GP6Q9HCN6 339 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 PARPBPQ9NWS1 579 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 UBQLN2Q9UHD9 624 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 KCNG2Q9UJ96 466 aa13.65□□□□□ -0.22
SHMT2-202ENST00000414700 ZNF593O00488 134 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-202ENST00000414700 NDUFA2O43678 99 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 CFL1P23528 166 aaKnown RBP13.64□□□□□ -0.23
SHMT2-202ENST00000414700 LAP3P28838 519 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 GBX2P52951 348 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-202ENST00000414700 ZNF85Q03923 595 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 POU4F2Q12837 409 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 IL18Q14116 193 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 P2RY14Q15391 338 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 CEACAM16Q2WEN9 425 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 ZNF100Q8IYN0 542 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 ACBD7Q8N6N7 88 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 C11orf40Q8WZ69 217 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 AMELYQ99218 206 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 GPR35Q9HC97 309 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 COMMD3Q9UBI1 195 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 MALT1Q9UDY8 824 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 PRR14LQ5THK1 2151 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 A0A0A6YYJ9 748 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 PSMD9O00233 223 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 TNFSF13O75888 250 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 EXOSC2Q13868 293 aaKnown RBP13.64□□□□□ -0.23
SHMT2-202ENST00000414700 SLC16A9Q7RTY1 509 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 LINC00346Q8IVM7 164 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 RBPMSQ93062 196 aaKnown RBP13.64□□□□□ -0.23
SHMT2-202ENST00000414700 CLEC4MQ9H2X3 399 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-202ENST00000414700 ISG20L2Q9H9L3 353 aaKnown RBP13.64□□□□□ -0.23
SHMT2-202ENST00000414700 GLRX2Q9NS18 164 aa13.64□□□□□ -0.23
SHMT2-202ENST00000414700 HPGDSO60760 199 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 KRT33AO76009 404 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 WNT11O96014 354 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 SPARCP09486 303 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 ANXA3P12429 323 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 STOMP27105 288 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 PTGER4P35408 488 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 EVX1P49640 407 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 RAB14P61106 215 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 RIPPLY2Q5TAB7 128 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 ZNF57Q68EA5 555 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-202ENST00000414700 CORO6Q6QEF8 472 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 LUZP2Q86TE4 346 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 CDC20BQ86Y33 519 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 NABP1Q96AH0 204 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 WBP1Q96G27 269 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 DIDO1Q9BTC0 2240 aaKnown RBP13.63□□□□□ -0.23
SHMT2-202ENST00000414700 ESPL1Q14674 2120 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 DAPL1A0PJW8 107 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 IRGMA1A4Y4 181 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 C7orf66A4D0T2 115 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 TUBAL3A6NHL2 446 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 GLI4P10075 376 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 NR2C1P13056 603 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 B4GALT1P15291 398 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 ZP3P21754 424 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 OR2A2Q6IF42 318 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 TFAP2EQ6VUC0 442 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 OTOSQ8NHW6 89 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 TMEM203Q969S6 136 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 ALG8Q9BVK2 526 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 DPCDQ9BVM2 203 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-202ENST00000414700 JAM3Q9BX67 310 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 LINC00470Q9BZP3 86 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 ADAM30Q9UKF2 790 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 GSTK1Q9Y2Q3 226 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 EMC9Q9Y3B6 208 aa13.63□□□□□ -0.23
SHMT2-202ENST00000414700 HIVEP3Q5T1R4 2406 aa13.62□□□□□ -0.23
SHMT2-202ENST00000414700 SMIM30A4D0T7 59 aa13.62□□□□□ -0.23
SHMT2-202ENST00000414700 OR2T7P0C7T2 308 aa13.62□□□□□ -0.23
SHMT2-202ENST00000414700 OR3A2P47893 321 aa13.62□□□□□ -0.23
SHMT2-202ENST00000414700 RPS25P62851 125 aaKnown RBP13.62□□□□□ -0.23
SHMT2-202ENST00000414700 PMPCAQ10713 525 aa13.62□□□□□ -0.23
SHMT2-202ENST00000414700 SGCAQ16586 387 aa13.62□□□□□ -0.23
SHMT2-202ENST00000414700 LRRC18Q8N456 261 aa13.62□□□□□ -0.23
SHMT2-202ENST00000414700 ZNF485Q8NCK3 441 aa13.62□□□□□ -0.23
SHMT2-202ENST00000414700 OR2T27Q8NH04 317 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms