RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CD14P08571 375 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 DANCRP0C864 163 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 PTAFRP25105 342 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 LAP3P28838 519 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 GCH1P30793 250 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 TTKP33981 857 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 MAGEA2P43356 314 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 PTH2RP49190 550 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 CENPAP49450 140 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 DGCR2P98153 550 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 NAAAQ02083 359 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 PLP2Q04941 152 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 BNIP1Q12981 228 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 SNTB2Q13425 540 aaKnown RBP4.2□□□□□ -1.74
VPS41-205ENST00000414632 KRR1Q13601 381 aaKnown RBP4.2□□□□□ -1.74
VPS41-205ENST00000414632 ETFDHQ16134 617 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 HIST3H3Q16695 136 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 GSG1Q2KHT4 349 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 ANXA2RQ3ZCQ2 193 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 SPATS1Q496A3 300 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 FAM98BQ52LJ0 330 aaKnown RBP4.2□□□□□ -1.74
VPS41-205ENST00000414632 MTX3Q5HYI7 312 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 CLEC12AQ5QGZ9 265 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 OR2T5Q6IEZ7 315 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 SLC25A47Q6Q0C1 308 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 SMARCD3Q6STE5 483 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 UGT2A3Q6UWM9 527 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 SLC16A14Q7RTX9 510 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 PIWIL3Q7Z3Z3 882 aaKnown RBP4.2□□□□□ -1.74
VPS41-205ENST00000414632 TMEM179BQ7Z7N9 219 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 ZNF584Q8IVC4 421 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 HS3ST5Q8IZT8 346 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 ZNF611Q8N823 705 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 AQP11Q8NBQ7 271 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 DNAAF1Q8NEP3 725 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 OR4C15Q8NGM1 316 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 OR2T29Q8NH02 315 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 AKR7LQ8NHP1 331 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 ZNF519Q8TB69 540 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 MAGEE2Q8TD90 523 aaPredicted RBP4.2□□□□□ -1.74
VPS41-205ENST00000414632 CANT1Q8WVQ1 401 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 DVL3Q92997 716 aaPredicted RBP4.2□□□□□ -1.74
VPS41-205ENST00000414632 SLCO4A1Q96BD0 722 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 LRR1Q96L50 414 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 WDFY2Q96P53 400 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 TSSK2Q96PF2 358 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 ERMAPQ96PL5 475 aaPredicted RBP4.2□□□□□ -1.74
VPS41-205ENST00000414632 FOXC2Q99958 501 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 DHRS9Q9BPW9 319 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 KCNS3Q9BQ31 491 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 IFT27Q9BW83 186 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 CHID1Q9BWS9 393 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 MRPL13Q9BYD1 178 aaKnown RBP4.2□□□□□ -1.74
VPS41-205ENST00000414632 PLA2G12AQ9BZM1 189 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 TRIM15Q9C019 465 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 SYT4Q9H2B2 425 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 OR52D1Q9H346 318 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 ANKRD19PQ9H560 264 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 DENND2DQ9H6A0 471 aaPredicted RBP4.2□□□□□ -1.74
VPS41-205ENST00000414632 MAGIXQ9H6Y5 334 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 REEP1Q9H902 201 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 RNF121Q9H920 327 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 KRCC1Q9NPI7 259 aaPredicted RBP4.2□□□□□ -1.74
VPS41-205ENST00000414632 SNTG1Q9NSN8 517 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 B3GNT2Q9NY97 397 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 SLC7A8Q9UHI5 535 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 FZR1Q9UM11 496 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 POMPQ9Y244 141 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 SIGLEC7Q9Y286 467 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 SAMHD1Q9Y3Z3 626 aaKnown RBP4.2□□□□□ -1.74
VPS41-205ENST00000414632 UGT2A1Q9Y4X1 527 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 IER3IP1Q9Y5U9 82 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 ARID1AO14497 2285 aa4.2□□□□□ -1.74
VPS41-205ENST00000414632 F8P00451 2351 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 ACANP16112 2415 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 IGHV2OR16-5A0A0B4J2B6 119 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 SLC22A23A1A5C7 686 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 PRSS37A4D1T9 235 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 TRIM64A6NGJ6 449 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 TRIM64BA6NI03 449 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 XKRYO14609 159 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 GNGT2O14610 69 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 GPRIN2O60269 458 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 MGRN1O60291 552 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 SLC16A7O60669 478 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 LY6HO94772 140 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 CCNB2O95067 398 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 UBL3O95164 117 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 MPZL1O95297 269 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 FARS2O95363 451 aaKnown RBP4.19□□□□□ -1.74
VPS41-205ENST00000414632 CST1P01037 141 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 IGKV3-15P01624 115 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 IGLV1-44P01699 117 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 IGHV4-39P01824 125 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 CRYAAP02489 173 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 OR8G3PP0DMU2 310 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 CBR1P16152 277 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 HIST1H1CP16403 213 aaKnown RBP4.19□□□□□ -1.74
VPS41-205ENST00000414632 CTLA4P16410 223 aa4.19□□□□□ -1.74
VPS41-205ENST00000414632 ZNF14P17017 642 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms