RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 USF1P22415 310 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 TMEM123Q8N131 208 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 FAM122AQ96E09 287 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 REEP6Q96HR9 211 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 PBX4Q9BYU1 374 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 WWTR1Q9GZV5 400 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 LYRM2Q9NU23 88 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 POMT2Q9UKY4 750 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 WNT11O96014 354 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 GLULP15104 373 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 PNLIPRP2P54317 469 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 RPS19BP1Q86WX3 136 aaKnown RBP12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 KMT5CQ86Y97 462 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 GCNT2Q8N0V5 402 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 FAM71CQ8NEG0 241 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 TVP23CQ96ET8 276 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 AKR1E2Q96JD6 320 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 ATF6BQ99941 703 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 RHOFQ9HBH0 211 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 ICOSLGO75144 302 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 SELEP16581 610 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 ZNF92Q03936 586 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 TMEM81Q6P7N7 255 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 PLXDC2Q6UX71 529 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 CMTM4Q8IZR5 234 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 OR51A4Q8NGJ6 313 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 SRRQ9GZT4 340 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 TWSG1Q9GZX9 223 aa12.47□□□□□ -0.41
SMARCA4-202ENST00000413806 NXPH3O95157 252 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 CLDN1O95832 211 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 ACKR3P25106 362 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 KIR2DL3P43628 341 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 PPP2CBP62714 309 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 PPP2CAP67775 309 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 RUNX2Q13950 521 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 TOMM20LQ6UXN7 152 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 BAP18Q8IXM2 172 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 OR13C8Q8NGS7 320 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 CNRIP1Q96F85 164 aaPredicted RBP12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 SCMH1Q96GD3 660 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 HIPK2Q9H2X6 1198 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 ZDHHC11Q9H8X9 412 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 TMEFF2Q9UIK5 374 aaPredicted RBP12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 M0R143 59 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 EMDP50402 254 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 UBE2MP61081 183 aaKnown RBP12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 CTF1Q16619 201 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 IL34Q6ZMJ4 242 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 APH1AQ96BI3 265 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 PCDHB10Q9UN67 800 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 ZNF727A8MUV8 499 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 HSPB6O14558 160 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 SMIM6P0DI80 62 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 RBP2P50120 134 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 GGNBP1Q5YKI7 109 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 BHLHA9Q7RTU4 235 aa12.46□□□□□ -0.41
SMARCA4-202ENST00000413806 A0A087X0M5 115 aa12.46□□□□□ -0.42
SMARCA4-202ENST00000413806 LOC102724200A0A096LPH7 203 aaPredicted RBP12.46□□□□□ -0.42
SMARCA4-202ENST00000413806 IGHV3-20A0A0C4DH32 117 aa12.46□□□□□ -0.42
SMARCA4-202ENST00000413806 A0A1B0GX30 115 aa12.46□□□□□ -0.42
SMARCA4-202ENST00000413806 PSMB6P28072 239 aa12.46□□□□□ -0.42
SMARCA4-202ENST00000413806 PCBP4P57723 403 aaKnown RBP12.46□□□□□ -0.42
SMARCA4-202ENST00000413806 IL10RAQ13651 578 aa12.46□□□□□ -0.42
SMARCA4-202ENST00000413806 OR51E1Q8TCB6 317 aa12.46□□□□□ -0.42
SMARCA4-202ENST00000413806 SEH1LQ96EE3 360 aa12.46□□□□□ -0.42
SMARCA4-202ENST00000413806 CMTM3Q96MX0 182 aa12.46□□□□□ -0.42
SMARCA4-202ENST00000413806 PLEKHF2Q9H8W4 249 aa12.46□□□□□ -0.42
SMARCA4-202ENST00000413806 TRAPPC4Q9Y296 219 aa12.46□□□□□ -0.42
SMARCA4-202ENST00000413806 MRPS2Q9Y399 296 aaKnown RBP12.46□□□□□ -0.42
SMARCA4-202ENST00000413806 TIMM10BQ9Y5J6 103 aa12.46□□□□□ -0.42
SMARCA4-202ENST00000413806 DLEC1Q9Y238 1755 aa12.46□□□□□ -0.42
SMARCA4-202ENST00000413806 KCNE1BA0A087WTH5 132 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 FITM1A5D6W6 292 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 DUSP1P28562 367 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 CCR2P41597 374 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 ELLP55199 621 aaPredicted RBP12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 NKG7Q16617 165 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 C9orf152Q5JTZ5 239 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 STAC2Q6ZMT1 411 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 LHFPL2Q6ZUX7 228 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 JAM3Q9BX67 310 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 CLCF1Q9UBD9 225 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 RNASEK-C17orf49H0YIS7 233 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 TRAF3IP2O43734 574 aaPredicted RBP12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 CD37P11049 281 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 FCER1GP30273 86 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 KCNAB1Q14722 419 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 GUK1Q16774 197 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 LRRTM1Q86UE6 522 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 SLC2A9Q9NRM0 540 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 LEUTXA8MZ59 168 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 IDSB3KWA1 339 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 SPINT2O43291 252 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 FCGR2CP31995 323 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 SUMO3P55854 103 aaPredicted RBP12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 ENDOGQ14249 297 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 CEBPEQ15744 281 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 LHX8Q68G74 356 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 CCDC190Q86UF4 302 aa12.45□□□□□ -0.42
SMARCA4-202ENST00000413806 SUMF1Q8NBK3 374 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms