RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SH3GL3Q99963 347 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 ACOT13Q9NPJ3 140 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 ASCL3Q9NQ33 180 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 PLEKHJ1Q9NW61 149 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 XCL2Q9UBD3 114 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 CTSZQ9UBR2 303 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 ACOT9Q9Y305 439 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 OR51B2Q9Y5P1 312 aa3.46□□□□□ -1.85
BRCA1-204ENST00000412061 MAPK8IP3Q9UPT6 1336 aa3.46□□□□□ -1.86
BRCA1-204ENST00000412061 BRCA1P38398 1863 aaKnown RBP3.46□□□□□ -1.86
BRCA1-204ENST00000412061 RALGAPA1Q6GYQ0 2036 aa3.46□□□□□ -1.86
BRCA1-204ENST00000412061 GON4LQ3T8J9 2241 aa3.46□□□□□ -1.86
BRCA1-204ENST00000412061 A0A0B4J2A0 478 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 A0A0B4J2E0 115 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 A6NDN8 102 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 HIDE1A8MVS5 230 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 H7C1H1 209 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 H7C423 109 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 SOCS3O14543 225 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 TBL1XO60907 577 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 RBBP9O75884 186 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 OR5F1O95221 314 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 UTS2O95399 124 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 RAB3DO95716 219 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 SNAP29O95721 258 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 EIF4EP06730 217 aaKnown RBP3.45□□□□□ -1.86
BRCA1-204ENST00000412061 SERPINA6P08185 405 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 PGA4P0DJD7 388 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 PGA3P0DJD8 388 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 PGA5P0DJD9 388 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 COX5BP10606 129 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 HSPD1P10809 573 aaKnown RBP3.45□□□□□ -1.86
BRCA1-204ENST00000412061 PGAM2P15259 253 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 PPP1R2P41236 205 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 ACTR1BP42025 376 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 GALR1P47211 349 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 DLX1P56177 255 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 MAGOHP61326 146 aaKnown RBP3.45□□□□□ -1.86
BRCA1-204ENST00000412061 HMGCS1Q01581 520 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 KDSRQ06136 332 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 CD47Q08722 323 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 FCHO2Q0JRZ9 810 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 PSG5Q15238 335 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 POU2AF1Q16633 256 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 TIMM23BQ5SRD1 257 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 C1orf100Q5SVJ3 147 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 LCN12Q6JVE5 192 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 PPP1R2P3Q6NXS1 205 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 EPGNQ6UW88 154 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 PEX26Q7Z412 305 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 FAM220AQ7Z4H9 259 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 RAB43Q86YS6 212 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 HIPK1Q86Z02 1210 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 BBS7Q8IWZ6 715 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 PGAM4Q8N0Y7 254 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 CYP4Z2PQ8N1L4 340 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 TMEM156Q8N614 296 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 OR4K2Q8NGD2 314 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 OR51S1Q8NGJ8 323 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 OR6Q1Q8NGQ2 317 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 MCOLN3Q8TDD5 553 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 TMEM234Q8WY98 164 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 CDS1Q92903 461 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 CPNE4Q96A23 557 aaPredicted RBP3.45□□□□□ -1.86
BRCA1-204ENST00000412061 SGTBQ96EQ0 304 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 WDR34Q96EX3 536 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 API5Q9BZZ5 524 aaKnown RBP3.45□□□□□ -1.86
BRCA1-204ENST00000412061 UGT1A7Q9HAW7 530 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 UGT1A8Q9HAW9 530 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 SHPKQ9UHJ6 478 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 C3orf18Q9UK00 162 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 VSIG4Q9Y279 399 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 CFAP65Q6ZU64 1925 aaKnown RBP3.45□□□□□ -1.86
BRCA1-204ENST00000412061 ELP1O95163 1332 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 LRRK1Q38SD2 2015 aa3.45□□□□□ -1.86
BRCA1-204ENST00000412061 IGHV7-81A0A0B4J1V7 117 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 SMIM23A6NLE4 172 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 ATP8B1O43520 1251 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 CDC40O60508 579 aaKnown RBP eCLIP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 DUSP14O95147 198 aaKnown RBP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 MPZL1O95297 269 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 OCM2P0CE71 109 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 CD37P11049 281 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 MLNP12872 115 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 LOXP28300 417 aaPredicted RBP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 OR10A3P58181 314 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 ELAVL2Q12926 359 aaKnown RBP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 OR10J3Q5JRS4 329 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 ZNF658Q5TYW1 1059 aaPredicted RBP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 SDHAF4Q5VUM1 108 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 ANKRD22Q5VYY1 191 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 OR2T5Q6IEZ7 315 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 Q6ZVH6 145 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 MRPL52Q86TS9 123 aaKnown RBP3.44□□□□□ -1.86
BRCA1-204ENST00000412061 DAW1Q8N136 415 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 PNKDQ8N490 385 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 TMEM252Q8N6L7 170 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 CSNK1G2-AS1Q8NCQ2 148 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 LFNGQ8NES3 379 aa3.44□□□□□ -1.86
BRCA1-204ENST00000412061 OR2T29Q8NH02 315 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms