RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 HOXA4Q00056 320 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 GK2Q14410 553 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 MPPED2Q15777 294 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 IFI44LQ53G44 452 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CLEC12AQ5QGZ9 265 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SFRP4Q6FHJ7 346 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 COLCA1Q6ZS62 124 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 FKBP9P1Q75LS8 142 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 PIP4P2Q8N4L2 257 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 BOLLQ8N9W6 283 aaKnown RBP11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 LINC01006Q8NI28 216 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 GATAD2BQ8WXI9 593 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 DYRK2Q92630 601 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 WDFY2Q96P53 400 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 TSSK2Q96PF2 358 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 TBX15Q96SF7 602 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 ACOXLQ9NUZ1 547 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 GMPR2Q9P2T1 348 aaKnown RBP11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 ERVK-18Q9QC07 812 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SIGLEC7Q9Y286 467 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 TMEM5Q9Y2B1 443 aa11.82□□□□□ -0.52
HLA-DQB2-229ENST00000411527 F5H5K5 113 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 GPR137BO60478 399 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 MMP9P14780 707 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CRABP1P29762 137 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CD200P41217 278 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CDKN2AP42771 156 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 RPL15P61313 204 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 MAPRE2Q15555 327 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 TAF9Q16594 264 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 PGM2L1Q6PCE3 622 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 ADCK1Q86TW2 530 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 NAA40Q86UY6 237 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SLC7A13Q8TCU3 470 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SPRYD4Q8WW59 207 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SLCO4A1Q96BD0 722 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 TRIM15Q9C019 465 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 RASSF4Q9H2L5 321 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SRA1Q9HD15 236 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 RNF7Q9UBF6 113 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CTSZQ9UBR2 303 aa11.81□□□□□ -0.52
HLA-DQB2-229ENST00000411527 IGHV1-69DA0A0B4J2H0 117 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 DCTN6O00399 190 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CXCR6O00574 342 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 GSTA4O15217 222 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 ADAM20O43506 726 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CLPXO76031 633 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 IGHV1-69P01742 117 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 IGHV4-59P01825 116 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 LCATP04180 440 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 ACSM4P0C7M7 580 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 RAD23AP54725 363 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 COX10Q12887 443 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 MALLQ13021 153 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 OR8G1Q15617 311 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 KCNJ8Q15842 424 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 METTL11BQ5VVY1 283 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 DNM1P34Q6PK57 102 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 DPY19L2P2Q6ZN68 376 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CBLL1Q75N03 491 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 PGAP1Q75T13 922 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CYP4Z1Q86W10 505 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 C1QL4Q86Z23 238 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 LINC00346Q8IVM7 164 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 PNLDC1Q8NA58 520 aaKnown RBP11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 LHX4Q969G2 390 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 HSH2DQ96JZ2 352 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 GPX7Q96SL4 187 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 PITX2Q99697 317 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 ANKRD19PQ9H560 264 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 FN3KRPQ9HA64 309 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 TCF7L1Q9HCS4 588 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SAR1AQ9NR31 198 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 MRGBPQ9NV56 204 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CMTM6Q9NX76 183 aa11.8□□□□□ -0.52
HLA-DQB2-229ENST00000411527 IGLV1-36A0A0B4J1U3 117 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 A0A0U1RQK1 487 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SLC22A31A6NKX4 558 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 HMGB1P1B2RPK0 211 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 C3orf80F5H4A9 247 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 LGALS8O00214 317 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 TXNDC12O95881 172 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CA6P23280 308 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 MDH1P40925 334 aaKnown RBP11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 IER3P46695 156 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 RPS6KA3P51812 740 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 FXYD6P3P58550 94 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 ARF6P62330 175 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 DBPQ10586 325 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SF3A3Q12874 501 aaKnown RBP eCLIP11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 OR8B8Q15620 311 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 KRTAP27-1Q3LI81 207 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 CFAP77Q6ZQR2 320 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 TSEN54Q7Z6J9 526 aaKnown RBP11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SCCPDHQ8NBX0 429 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 RSRC1Q96IZ7 334 aaKnown RBP11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SIRPDQ9H106 197 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 SMURF1Q9HCE7 757 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 B9D1Q9UPM9 204 aa11.79□□□□□ -0.52
HLA-DQB2-229ENST00000411527 AURKCQ9UQB9 309 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms