RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 F5H5P2 479 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 DCTN3O75935 186 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 CYB5R3P00387 301 aaPredicted RBP12.37□□□□□ -0.43
CBX3-203ENST00000409747 LCATP04180 440 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 WNT2P09544 360 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 GGT2P36268 569 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 GNB2P62879 340 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 MXRA7P84157 204 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 GK2Q14410 553 aaPredicted RBP12.37□□□□□ -0.43
CBX3-203ENST00000409747 PGBD2Q6P3X8 592 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 LRRN1Q6UXK5 716 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 PGAP1Q75T13 922 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 DOK3Q7L591 496 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 MRPL21Q7Z2W9 205 aaKnown RBP12.37□□□□□ -0.43
CBX3-203ENST00000409747 MOGAT3Q86VF5 341 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 KLBQ86Z14 1044 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 PROKR2Q8NFJ6 384 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 OR4C15Q8NGM1 316 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 OR2T4Q8NH00 348 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 NEIL1Q96FI4 390 aaPredicted RBP12.37□□□□□ -0.43
CBX3-203ENST00000409747 SLC22A4Q9H015 551 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 FN3KQ9H479 309 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 TMEM165Q9HC07 324 aa12.37□□□□□ -0.43
CBX3-203ENST00000409747 H0YL77 283 aa12.36□□□□□ -0.43
CBX3-203ENST00000409747 M0R135 149 aa12.36□□□□□ -0.43
CBX3-203ENST00000409747 MSX2P35548 267 aaPredicted RBP12.36□□□□□ -0.43
CBX3-203ENST00000409747 MNAT1P51948 309 aa12.36□□□□□ -0.43
CBX3-203ENST00000409747 RAD23AP54725 363 aa12.36□□□□□ -0.43
CBX3-203ENST00000409747 RSPO1Q2MKA7 263 aaPredicted RBP12.36□□□□□ -0.43
CBX3-203ENST00000409747 ZNF404Q494X3 552 aa12.36□□□□□ -0.43
CBX3-203ENST00000409747 SLC35F1Q5T1Q4 408 aa12.36□□□□□ -0.43
CBX3-203ENST00000409747 SIGLECL1Q8N7X8 197 aa12.36□□□□□ -0.43
CBX3-203ENST00000409747 OR8B3Q8NGG8 313 aa12.36□□□□□ -0.43
CBX3-203ENST00000409747 OR11L1Q8NGX0 322 aa12.36□□□□□ -0.43
CBX3-203ENST00000409747 SGMS2Q8NHU3 365 aa12.36□□□□□ -0.43
CBX3-203ENST00000409747 SPRYD4Q8WW59 207 aaPredicted RBP12.36□□□□□ -0.43
CBX3-203ENST00000409747 ZNF799Q96GE5 643 aa12.36□□□□□ -0.43
CBX3-203ENST00000409747 OR8B2Q96RD0 313 aa12.36□□□□□ -0.43
CBX3-203ENST00000409747 PLA2G12AQ9BZM1 189 aa12.36□□□□□ -0.43
CBX3-203ENST00000409747 PNRC2Q9NPJ4 139 aaKnown RBP12.36□□□□□ -0.43
CBX3-203ENST00000409747 ARL2BPQ9Y2Y0 163 aa12.36□□□□□ -0.43
CBX3-203ENST00000409747 PPIAL4AQ9Y536 164 aa12.36□□□□□ -0.43
CBX3-203ENST00000409747 RBMXP38159 391 aaKnown RBP12.35□□□□□ -0.43
CBX3-203ENST00000409747 HMGA2P52926 109 aa12.35□□□□□ -0.43
CBX3-203ENST00000409747 PAX8Q06710 450 aa12.35□□□□□ -0.43
CBX3-203ENST00000409747 TUSC1Q2TAM9 212 aa12.35□□□□□ -0.43
CBX3-203ENST00000409747 CLEC12AQ5QGZ9 265 aa12.35□□□□□ -0.43
CBX3-203ENST00000409747 DEFB107AQ8IZN7 70 aa12.35□□□□□ -0.43
CBX3-203ENST00000409747 Q8TCH9 128 aa12.35□□□□□ -0.43
CBX3-203ENST00000409747 TMEM246Q9BRR3 403 aa12.35□□□□□ -0.43
CBX3-203ENST00000409747 TRIM15Q9C019 465 aa12.35□□□□□ -0.43
CBX3-203ENST00000409747 MS4A7Q9GZW8 240 aaPredicted RBP12.35□□□□□ -0.43
CBX3-203ENST00000409747 EGLN3Q9H6Z9 239 aa12.35□□□□□ -0.43
CBX3-203ENST00000409747 MRPL22Q9NWU5 206 aaKnown RBP12.35□□□□□ -0.43
CBX3-203ENST00000409747 ZNF69Q9UC07 566 aa12.35□□□□□ -0.43
CBX3-203ENST00000409747 LYVE1Q9Y5Y7 322 aa12.35□□□□□ -0.43
CBX3-203ENST00000409747 IGHV2-70DA0A0C4DH43 119 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 TNFRSF11BO00300 401 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 HLA-DPB1P04440 258 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 PRTN3P24158 256 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 CD200P41217 278 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 FOXL1Q12952 345 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 AWAT1Q58HT5 328 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 KLF17Q5JT82 389 aaPredicted RBP12.34□□□□□ -0.43
CBX3-203ENST00000409747 DCDC5Q6ZRR9 648 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 RAB40AQ8WXH6 277 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 SLCO4A1Q96BD0 722 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 MAP6Q96JE9 813 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 IL20Q9NYY1 176 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 ACTR3BQ9P1U1 418 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 IGHV3-64DA0A0J9YX35 117 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 BHLHE40O14503 412 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 PHYHO14832 338 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 ZNF205O95201 554 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 MTNR1AP48039 350 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 PITPNBP48739 271 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 OR8G1Q15617 311 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 KCNJ8Q15842 424 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 DRAM2Q6UX65 266 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 RASSF6Q6ZTQ3 369 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 PARP8Q8N3A8 854 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 OPA3Q9H6K4 179 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 FN3KRPQ9HA64 309 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 TBC1D23Q9NUY8 699 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 ARL8BQ9NVJ2 186 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 CLN8Q9UBY8 286 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 BAIAP2Q9UQB8 552 aa12.34□□□□□ -0.43
CBX3-203ENST00000409747 DNAJC9-AS1A6NH13 148 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 GMDSO60547 372 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 CCNB2O95067 398 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 HKR1P10072 659 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 PYCR1P32322 319 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 CD80P33681 288 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 MAGEA2P43356 314 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 GNGT1P63211 74 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 PAX2Q02962 417 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 BAMBIQ13145 260 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 MAB21L1Q13394 359 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 C9orf139Q6ZV77 190 aa12.33□□□□□ -0.44
CBX3-203ENST00000409747 CYB561A3Q8NBI2 242 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms