RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ISG15P05161 165 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 CCL2P13500 99 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 ACHEP22303 614 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 CRYGSP22914 178 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 APEX1P27695 318 aaKnown RBP10.87□□□□□ -0.67
CHMP3-204ENST00000409727 PTGER4P35408 488 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 SNAI3Q3KNW1 292 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 CEP78Q5JTW2 689 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 TMEM244Q5VVB8 128 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 Q6ZT83 130 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 NCCRP1Q6ZVX7 275 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-204ENST00000409727 ZNF627Q7L945 461 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 TPRA1Q86W33 373 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 DACH2Q96NX9 599 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 MOB1AQ9H8S9 216 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 GPR84Q9NQS5 396 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 COMMD3Q9UBI1 195 aa10.87□□□□□ -0.67
CHMP3-204ENST00000409727 TRBV5-7A0A0A0MS05 114 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 TRAV1-2A0A0B4J238 106 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 A0A1B0GVI7 797 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 SLC2A2P11168 524 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-204ENST00000409727 CTSSP25774 331 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 TPTEP56180 551 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 RAB1AP62820 205 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 PMPCAQ10713 525 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 ECH1Q13011 328 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 MOGQ16653 247 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 TBRG1Q3YBR2 411 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 SFXN4Q6P4A7 337 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 STAC2Q6ZMT1 411 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 PRSS45Q7RTY3 260 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 LAX1Q8IWV1 398 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 DNAAF1Q8NEP3 725 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 PHYHIPQ92561 330 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 AP3S1Q92572 193 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 BCL2L2Q92843 193 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-204ENST00000409727 SLITRK2Q9H156 845 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 TP63Q9H3D4 680 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-204ENST00000409727 PLSCR4Q9NRQ2 329 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 TAS2R4Q9NYW5 299 aa10.86□□□□□ -0.67
CHMP3-204ENST00000409727 CRNNQ9UBG3 495 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-204ENST00000409727 A0A0B4J203 849 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 A0A0G2JK05 382 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 IQCMA0A1B0GVH7 501 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 TMEM8BA6NDV4 472 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 LCATP04180 440 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 CD2P06729 351 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 GLI4P10075 376 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 BMP4P12644 408 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 OTX1P32242 354 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-204ENST00000409727 PRSS12P56730 875 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 TGFBR3Q03167 851 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 MADCAM1Q13477 382 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 GSG1Q2KHT4 349 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 TMEM53Q6P2H8 277 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 KDF1Q8NAX2 398 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-204ENST00000409727 FGGYQ96C11 551 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 CEP19Q96LK0 163 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 NKX3-1Q99801 234 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-204ENST00000409727 SLC30A2Q9BRI3 323 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 SLC17A5Q9NRA2 495 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 DSPP15924 2871 aaKnown RBP10.85□□□□□ -0.67
CHMP3-204ENST00000409727 A0A1B0GTI1 187 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 C5orf49A4QMS7 147 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 J3QRK9 145 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 CGAP01215 116 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 APOC1P02654 83 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 ADRA2CP18825 462 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 TIMP3P35625 211 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 ARR3P36575 388 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 GNALP38405 381 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 UBE2NP61088 152 aaKnown RBP10.85□□□□□ -0.67
CHMP3-204ENST00000409727 HES5Q5TA89 166 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 ASPHD2Q6ICH7 369 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 DRAM2Q6UX65 266 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 MDP1Q86V88 176 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 CXorf67Q86X51 503 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-204ENST00000409727 OR1J2Q8NGS2 313 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 OR2AE1Q8NHA4 323 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 NANOS1Q8WY41 292 aaKnown RBP10.85□□□□□ -0.67
CHMP3-204ENST00000409727 GFI1Q99684 422 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 ABCB9Q9NP78 766 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 CKLFQ9UBR5 152 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 PEX16Q9Y5Y5 336 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 A3GALT2U3KPV4 340 aa10.85□□□□□ -0.67
CHMP3-204ENST00000409727 RTTNQ86VV8 2226 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 A0A075B6Q4 140 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 LOC100509620A0A075B734 347 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 ANXA2P2A6NMY6 339 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 PDCD5O14737 125 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 UBL3O95164 117 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 PAHP00439 452 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 RAF1P04049 648 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 INHBBP09529 407 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 BMP5P22003 454 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 STOMP27105 288 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 PLP2Q04941 152 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 LRRTM1Q86UE6 522 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 GABRG1Q8N1C3 465 aa10.84□□□□□ -0.67
CHMP3-204ENST00000409727 ADAT3Q96EY9 351 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms