RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 USF3Q68DE3 2245 aa12.65□□□□□ -0.38
SUMO1-207ENST00000409498 ARID1AO14497 2285 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 ACOD1A6NK06 481 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 PRR32B1ATL7 298 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 ZNF670-ZNF695F2Z2N8 137 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 M0R233 179 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 CLIC3O95833 236 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 LCATP04180 440 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 HSD11B1P28845 292 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 MMP15P51511 669 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 PRKXP51817 358 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 ART1P52961 327 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 CXCR4P61073 352 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 ZNF684Q5T5D7 378 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 DNM1P46Q6ZS02 220 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.64□□□□□ -0.39
SUMO1-207ENST00000409498 EGFL6Q8IUX8 553 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 CYGBQ8WWM9 190 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 SPSB4Q96A44 273 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 MROQ9BYG7 248 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 BARX1Q9HBU1 254 aaPredicted RBP12.64□□□□□ -0.39
SUMO1-207ENST00000409498 CYSLTR2Q9NS75 346 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 NKIRAS2Q9NYR9 191 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 TAAR3PQ9P1P4 343 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 AASSQ9UDR5 926 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 FZR1Q9UM11 496 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 LRP12Q9Y561 859 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 AKAP9Q99996 3911 aa12.64□□□□□ -0.39
SUMO1-207ENST00000409498 F12P00748 615 aaPredicted RBP12.63□□□□□ -0.39
SUMO1-207ENST00000409498 IGHV4-39P01824 125 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 ADH4P08319 380 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 DBTP11182 482 aaKnown RBP12.63□□□□□ -0.39
SUMO1-207ENST00000409498 CX3CR1P49238 355 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 ATP5J2P56134 94 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 PSMA6P60900 246 aaKnown RBP12.63□□□□□ -0.39
SUMO1-207ENST00000409498 IL5RAQ01344 420 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 ZNF91Q05481 1191 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 GK2Q14410 553 aaPredicted RBP12.63□□□□□ -0.39
SUMO1-207ENST00000409498 SNAI3Q3KNW1 292 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 SPATA46Q5T0L3 261 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 ZNF322Q6U7Q0 402 aaPredicted RBP12.63□□□□□ -0.39
SUMO1-207ENST00000409498 LRRN1Q6UXK5 716 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 SPNS3Q6ZMD2 512 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 SPATC1Q76KD6 591 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 KRT77Q7Z794 578 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 ZNF283Q8N7M2 679 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 OR52H1Q8NGJ2 320 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 NEU4Q8WWR8 484 aaPredicted RBP12.63□□□□□ -0.39
SUMO1-207ENST00000409498 ITFG2Q969R8 447 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 CMBLQ96DG6 245 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 RNFT2Q96EX2 444 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 REPIN1Q9BWE0 567 aaKnown RBP12.63□□□□□ -0.39
SUMO1-207ENST00000409498 RAB1BQ9H0U4 201 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 OPA3Q9H6K4 179 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 PURGQ9UJV8 347 aaKnown RBP12.63□□□□□ -0.39
SUMO1-207ENST00000409498 BOLA1Q9Y3E2 137 aa12.63□□□□□ -0.39
SUMO1-207ENST00000409498 RPL36Q9Y3U8 105 aaKnown RBP12.63□□□□□ -0.39
SUMO1-207ENST00000409498 A0A1B0GWJ7 208 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 A0A1W2PPW3 197 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 A0A1W2PQL4 384 aaPredicted RBP12.62□□□□□ -0.39
SUMO1-207ENST00000409498 C17orf100A8MU93 164 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 IQCF6A8MYZ5 107 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 XRCC2O43543 280 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 NDUFS7O75251 213 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 SRSF10O75494 262 aaKnown RBP12.62□□□□□ -0.39
SUMO1-207ENST00000409498 SULT1C4O75897 302 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 ADRA2AP08913 450 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 ANOS1P23352 680 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 ATP6V1E1P36543 226 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 SLC6A9P48067 706 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 MMP16P51512 607 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 EFNA4P52798 201 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 AQP4P55087 323 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 ZNF121P58317 390 aaPredicted RBP12.62□□□□□ -0.39
SUMO1-207ENST00000409498 ACTC1P68032 377 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 ACTA1P68133 377 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 ZNF85Q03923 595 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 RAB40BQ12829 278 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 MALLQ13021 153 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 SSX6Q7RTT6 188 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 C8orf59Q8N0T1 100 aaPredicted RBP12.62□□□□□ -0.39
SUMO1-207ENST00000409498 RFLNBQ8N5W9 214 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 LGALS12Q96DT0 336 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 PERPQ96FX8 193 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 SORCS2Q96PQ0 1159 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 JAM3Q9BX67 310 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 RGCCQ9H4X1 137 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 PTTG3PQ9NZH4 202 aa12.62□□□□□ -0.39
SUMO1-207ENST00000409498 MRM2Q9UI43 246 aaKnown RBP12.62□□□□□ -0.39
SUMO1-207ENST00000409498 CHD3Q12873 2000 aaKnown RBP12.61□□□□□ -0.39
SUMO1-207ENST00000409498 IGHA1P01876 353 aa12.61□□□□□ -0.39
SUMO1-207ENST00000409498 MT-ND5P03915 603 aa12.61□□□□□ -0.39
SUMO1-207ENST00000409498 GNAO1P09471 354 aa12.61□□□□□ -0.39
SUMO1-207ENST00000409498 SELEP16581 610 aa12.61□□□□□ -0.39
SUMO1-207ENST00000409498 ALDH3B1P43353 468 aa12.61□□□□□ -0.39
SUMO1-207ENST00000409498 RIDAP52758 137 aaKnown RBP12.61□□□□□ -0.39
SUMO1-207ENST00000409498 CDK5R2Q13319 367 aa12.61□□□□□ -0.39
SUMO1-207ENST00000409498 HLXQ14774 488 aaPredicted RBP12.61□□□□□ -0.39
SUMO1-207ENST00000409498 NKPD1Q17RQ9 610 aa12.61□□□□□ -0.39
SUMO1-207ENST00000409498 ALKBH6Q3KRA9 238 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms