RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 ACSM3Q53FZ2 586 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 AKIRIN2Q53H80 203 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 AWAT1Q58HT5 328 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ZNF311Q5JNZ3 666 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ACSM5Q6NUN0 579 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 PODNL1Q6PEZ8 512 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ARL9Q6T311 187 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ZNF852Q6ZMS4 543 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 RANBP3LQ86VV4 465 aaPredicted RBP4.86□□□□□ -1.63
CLK1-202ENST00000409403 SCN4BQ8IWT1 228 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 MUC20Q8N307 709 aaPredicted RBP4.86□□□□□ -1.63
CLK1-202ENST00000409403 ZNF614Q8N883 585 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 STEAP2Q8NFT2 490 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 OR6J1Q8NGC5 347 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 OR2L8Q8NGY9 312 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 LGALS14Q8TCE9 139 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 CXorf40AQ8TE69 158 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 PIK3IP1Q96FE7 263 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 SMIM8Q96KF7 97 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 PRRC1Q96M27 445 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 MICU1Q9BPX6 476 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 EBPLQ9BY08 206 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 SLITRK2Q9H156 845 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 GAL3ST2Q9H3Q3 398 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 IL21RQ9HBE5 538 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 NRIP3Q9NQ35 241 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 UBQLN4Q9NRR5 601 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 C2orf42Q9NWW7 574 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ARL15Q9NXU5 204 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 RHCGQ9UBD6 479 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 SERGEFQ9UGK8 458 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 Q9Y3F1 56 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 PCDHGA5Q9Y5G8 931 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 FLVCR1Q9Y5Y0 555 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 COL4A2P08572 1712 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 MED13LQ71F56 2210 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 SPTBN1Q01082 2364 aaKnown RBP4.86□□□□□ -1.63
CLK1-202ENST00000409403 TEX13DA0A0J9YY54 714 aaPredicted RBP4.86□□□□□ -1.63
CLK1-202ENST00000409403 A0A1B0GTI1 187 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 A0A1W2PPE3 182 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 GNG14A0A1W2PPG7 69 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 SMCO3A2RU48 225 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 TVP23AA6NH52 213 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 A6NIN4 97 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 SH2D7A6NKC9 451 aaPredicted RBP4.86□□□□□ -1.63
CLK1-202ENST00000409403 OR6C76A6NM76 312 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 OR52A4PA6NMU1 304 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 RPL36A-HNRNPH2H7BZ11 118 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 SULT2B1O00204 365 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 CLDN5O00501 218 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 DVL1O14640 695 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 TAAR5O14804 337 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 FFAR1O14842 300 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 SURF4O15260 269 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 P2RX6O15547 441 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 FMO6PO60774 539 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 PRAMEF11O60813 436 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 AIFM1O95831 613 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 TBX18O95935 607 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 CD5P06127 495 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 CRHP06850 196 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 UCHL1P09936 223 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 OR8G3PP0DMU2 310 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 OR12D1P0DN82 309 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 DAOP14920 347 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 KCNE1P15382 129 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 HLA-GP17693 338 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 GABRR1P24046 479 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ACKR3P25106 362 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 CD34P28906 385 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 TIA1P31483 386 aaKnown RBP eCLIP4.86□□□□□ -1.636e-7■■□□□ 13.4
CLK1-202ENST00000409403 SOAT1P35610 550 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 KIR3DL2P43630 455 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 P2RX1P51575 399 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 OR10A3P58181 314 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ACTA2P62736 377 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ACTG2P63267 376 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 SEMG2Q02383 582 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ZNF763Q0D2J5 394 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 EIF4EBP2Q13542 120 aaPredicted RBP4.86□□□□□ -1.63
CLK1-202ENST00000409403 RBM39Q14498 530 aaKnown RBP4.86□□□□□ -1.63
CLK1-202ENST00000409403 ALG11Q2TAA5 492 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 PGGHGQ32M88 737 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 SLC25A35Q3KQZ1 300 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 GXYLT1Q4G148 440 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 AARDQ4LEZ3 155 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 ZNF805Q5CZA5 627 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 MS4A13Q5J8X5 152 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 PRAMEF17Q5VTA0 474 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 LIPNQ5VXI9 398 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 SUMO4Q6EEV6 95 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 SLC22A25Q6T423 547 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 DNM1P46Q6ZS02 220 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 C1orf122Q6ZSJ8 110 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 TPGS1Q6ZTW0 290 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 PAQR9Q6ZVX9 377 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 BHLHA9Q7RTU4 235 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 PRSS45Q7RTY3 260 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 FJX1Q86VR8 437 aa4.86□□□□□ -1.63
CLK1-202ENST00000409403 MON1AQ86VX9 555 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms