RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 CYB5AP00167 134 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 GCGP01275 180 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 HMGN2P05204 90 aaKnown RBP9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 SFTPBP07988 381 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 TMIGD3P0DMS9 266 aaPredicted RBP9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 SLC16A1P53985 500 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 PPP1R1AQ13522 171 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 CLINT1Q14677 625 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 SLC9A5Q14940 896 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 ATXN7L3Q14CW9 347 aaPredicted RBP9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 GUK1Q16774 197 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 LRRC37A5PQ49AS3 106 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 CCSMST1Q4G0I0 132 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 ACTBL2Q562R1 376 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 KHDC3LQ587J8 217 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 DCAF10Q5QP82 559 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 CDPF1Q6NVV7 123 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 SLC23A3Q6PIS1 610 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 THSD4Q6ZMP0 1018 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 TMPRSS12Q86WS5 348 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 GKN2Q86XP6 184 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 CCDC54Q8NEL0 328 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 OR8G5Q8NG78 346 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 OR2AP1Q8NGE2 309 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 OR4K15Q8NH41 348 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 ISOC2Q96AB3 205 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 OR7D2Q96RA2 312 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 NMNAT2Q9BZQ4 307 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 SYNPO2LQ9H987 977 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 CAPN10Q9HC96 672 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 FAM212BQ9NTI7 297 aaPredicted RBP9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 PRODH2Q9UF12 536 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 VSIG4Q9Y279 399 aa9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 ZNF443Q9Y2A4 671 aaPredicted RBP9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 STRAPQ9Y3F4 350 aaKnown RBP9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 MDC1Q14676 2089 aaKnown RBP9.54□□□□□ -0.88
NIF3L1-204ENST00000409357 ZNF726A6NNF4 738 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 H0YIZ8 118 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 M0R036 132 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 DLEU1O43261 78 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 HIST1H2BKO60814 126 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 HIST1H2BJP06899 126 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 OR5AC1P0C628 307 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 SEC11BP0C7V7 166 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 DAOP14920 347 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 FOLR1P15328 257 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 HIST1H2BOP23527 126 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 IL2RGP31785 369 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 HIST1H2BBP33778 126 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 AQP2P41181 271 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 RPS10P46783 165 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 HIST1H2BDP58876 126 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 HIST1H2BCP62807 126 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 SLC10A1Q14973 349 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 CST6Q15828 149 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 HIST2H2BEQ16778 126 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 POM121L1PQ3SYA9 428 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 COA6Q5JTJ3 125 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 ZNF776Q68DI1 518 aaPredicted RBP9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 FDX2Q6P4F2 183 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 Q6ZVU0 165 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 OR6K2Q8NGY2 324 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 FAM174AQ8TBP5 190 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 CDS1Q92903 461 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 HIST1H2BHQ93079 126 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 SLC22A18Q96BI1 424 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 BPIFA2Q96DR5 249 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 C5orf34Q96MH7 638 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 HIST1H2BNQ99877 126 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 HIST1H2BMQ99879 126 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 NUDT16L1Q9BRJ7 211 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 TGIF2Q9GZN2 237 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 CST11Q9H112 138 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 SPACA1Q9HBV2 294 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 CHRNA9Q9UGM1 479 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 MRPS33Q9Y291 106 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 MED31Q9Y3C7 131 aa9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 KMT2BQ9UMN6 2715 aaPredicted RBP9.53□□□□□ -0.88
NIF3L1-204ENST00000409357 DSPP15924 2871 aaKnown RBP9.52□□□□□ -0.88
NIF3L1-204ENST00000409357 A0A0A6YYD5 115 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 EDDM13A0A1B0GTR0 161 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 A0A1W2PP55 124 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 SMCO3A2RU48 225 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 TMEM212A6NML5 194 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 UMAD1C9J7I0 102 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 STMND1H3BQB6 276 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 RAB27BO00194 218 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 ARPC3O15145 178 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 BRINP1O60477 761 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 TSPAN15O95858 294 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 PMP2P02689 132 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 RPS4Y1P22090 263 aaKnown RBP9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 CCR4P51679 360 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 RAC1P63000 192 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 NKX6-1P78426 367 aaPredicted RBP9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 TMEM35AQ53FP2 167 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 ARHGAP40Q5TG30 622 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 OR2A2Q6IF42 318 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 SLC35D2Q76EJ3 337 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms