RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ENTPD1P49961 510 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 MMP16P51512 607 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 SLC25A1P53007 311 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 GRB2P62993 217 aaKnown RBP7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 KCNJ8Q15842 424 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 SNCBQ16143 134 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 KRTAP27-1Q3LI81 207 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 TMEM255AQ5JRV8 349 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 SLC35F1Q5T1Q4 408 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 OR2T2Q6IF00 324 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 ZNF770Q6IQ21 691 aaPredicted RBP7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 CORO6Q6QEF8 472 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 CD300LDQ6UXZ3 194 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 CFAP77Q6ZQR2 320 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 LRRC28Q86X40 367 aaPredicted RBP7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 KLBQ86Z14 1044 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 AQP12AQ8IXF9 295 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 OR5AS1Q8N127 324 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 BPIFB2Q8N4F0 458 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 SPERTQ8NA61 448 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 PLPP7Q8NBV4 271 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 OR10G2Q8NGC3 310 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 CCDC124Q96CT7 223 aaKnown RBP7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 MEGF10Q96KG7 1140 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 SLC30A2Q9BRI3 323 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 COPS4Q9BT78 406 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 RBM4Q9BWF3 364 aaKnown RBP7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 FN3KQ9H479 309 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 POFUT1Q9H488 388 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 TOR3AQ9H497 397 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 C7orf69Q9H7B7 122 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 ZNF556Q9HAH1 456 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 PATZ1Q9HBE1 687 aaKnown RBP7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 TRIM36Q9NQ86 728 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 COMMD3-BMI1R4GMX3 469 aa7.67□□□□□ -1.18
SNORD88A-201ENST00000408314 DHRS12A0PJE2 317 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 A8MXK9 166 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 H3BN98 237 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 TMEM178BH3BS89 294 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 TRIM77I1YAP6 450 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 XRCC2O43543 280 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 GMDSO60547 372 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 E2F6O75461 281 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 GPANK1O95872 356 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 CST1P01037 141 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 GASTP01350 101 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 SPARCP09486 303 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 RPS2P15880 293 aaKnown RBP7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 CFL1P23528 166 aaKnown RBP7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 PYCR1P32322 319 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 GRK5P34947 590 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 DDOSTP39656 456 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 LCN2P80188 198 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 GK2Q14410 553 aaPredicted RBP7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 HLXQ14774 488 aaPredicted RBP7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 OR8G1Q15617 311 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 ARMCX4Q5H9R4 360 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 TEX30Q5JUR7 227 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 OTPQ5XKR4 325 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 BTNL3Q6UXE8 466 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 RBMS3Q6XE24 437 aaKnown RBP7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 Q6ZR03 302 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 RHOUQ7L0Q8 258 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 FTMTQ8N4E7 242 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 SLC37A3Q8NCC5 494 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 BHLHE23Q8NDY6 225 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 OR10AD1Q8NGE0 317 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 OR6K6Q8NGW6 343 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 GIPC3Q8TF64 312 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 DNAJC9Q8WXX5 260 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 KCNJ15Q99712 375 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 ZMAT3Q9HA38 289 aaKnown RBP7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 NTN4Q9HB63 628 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 GCM1Q9NP62 436 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 CMC2Q9NRP2 79 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 C14orf119Q9NWQ9 140 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 MRPL22Q9NWU5 206 aaKnown RBP7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 MIOXQ9UGB7 285 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 POLR3KQ9Y2Y1 108 aaPredicted RBP7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 U3KQV3 271 aa7.66□□□□□ -1.18
SNORD88A-201ENST00000408314 A0A1B0GWJ7 208 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 GGT3PA6NGU5 568 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 HAX1O00165 279 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 GYG2O15488 501 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 DYSFO75923 2080 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 SOX14O95416 240 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 HMGN1P05114 100 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 SPI1P17947 270 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 HSD11B1P28845 292 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 OTX1P32242 354 aaPredicted RBP7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 CD200P41217 278 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 HILS1P60008 231 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 CRMP1Q14194 572 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 FLOT2Q14254 428 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 ZMYND11Q15326 602 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 PCK2Q16822 640 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 SHFQ7M4L6 423 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 TRPM8Q7Z2W7 1104 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 DCXRQ7Z4W1 244 aa7.65□□□□□ -1.18
SNORD88A-201ENST00000408314 CYB561A3Q8NBI2 242 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms