RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CT45A3Q8NHU0 189 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 SDR42E1Q8WUS8 393 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 UCN3Q969E3 161 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 NRIP2Q9BQI9 281 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 YIPF3Q9GZM5 350 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 TOLLIPQ9H0E2 274 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 NKIRAS1Q9NYS0 192 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 RCL1Q9Y2P8 373 aaKnown RBP3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 MRPS18BQ9Y676 258 aaKnown RBP3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 TNRQ92752 1358 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 NISCHQ9Y2I1 1504 aa3.49□□□□□ -1.85
HMGB1P13-201ENST00000406019 MAP3K15Q6ZN16 1313 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 PCDH11XQ9BZA7 1347 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 A0A0B4J2A0 478 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 PRSS37A4D1T9 235 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 ZNF98A6NK75 572 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 LYRM9A8MSI8 78 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 MIF4GDA9UHW6 222 aaKnown RBP3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 CENPBD1B2RD01 187 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 ATP6V1G2-DDX39BF2Z307 99 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 F6UB75 175 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 TOR1AO14656 332 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 TNFSF11O14788 317 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 PHOX2AO14813 284 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 NUPL2O15504 423 aaKnown RBP3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 CHMP2AO43633 222 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 KDELR3O43731 214 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 FAM189A1O60320 539 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 ADAP1O75689 374 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 RPP14O95059 124 aaKnown RBP3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 KRTAP1-4P0C5Y4 121 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 RD3LP0DJH9 198 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 GIMD1P0DJR0 217 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 TDGF1P13385 188 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 SERPINB1P30740 379 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 CEACAM3P40198 252 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 CAPZBP47756 277 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 TDGF1P3P51864 188 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 CCNG1P51959 295 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 FGF8P55075 233 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 CXCR4P61073 352 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 STXBP1P61764 594 aaKnown RBP3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 RPS15AP62244 130 aaKnown RBP3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 IGLV3-21P80748 117 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 SP4Q02446 784 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 AQP6Q13520 282 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 NSDHLQ15738 373 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 RPEL1Q2QD12 228 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 BRMS1LQ5PSV4 323 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 C3orf33Q6P1S2 294 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 IL34Q6ZMJ4 242 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 SH2D6Q7Z4S9 175 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 SLC13A5Q86YT5 568 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 INO80EQ8NBZ0 244 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR5T3Q8NGG3 340 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR2G3Q8NGZ4 309 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 MARC2Q969Z3 335 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 DGCR14Q96DF8 476 aaKnown RBP3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 C16orf74Q96GX8 76 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 ANKRD36BP1Q96IX9 119 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 PACRGQ96M98 296 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR5B12Q96R08 314 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 TSC22D3Q99576 134 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 C6orf62Q9GZU0 229 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 ACP6Q9NPH0 428 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 IMP3Q9NV31 184 aaKnown RBP3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 ARMC1Q9NVT9 282 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 CMTM6Q9NX76 183 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 SLC17A7Q9P2U7 560 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 SHPKQ9UHJ6 478 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 C3orf18Q9UK00 162 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 ACOT9Q9Y305 439 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 SLC22A7Q9Y694 548 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 CCNB3Q8WWL7 1395 aa3.48□□□□□ -1.85
HMGB1P13-201ENST00000406019 A0A0G2JN53 185 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 SYCE1LA8MT33 242 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 A8MUA0 341 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 SMKR1H3BMG3 65 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 H7C0C1 242 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 LIN7AO14910 233 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 DENRO43583 198 aaKnown RBP3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 DPM1O60762 260 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 PFDN1O60925 122 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 SERPINB7O75635 380 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 MMP23AO75900 390 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 SUPT7LO94864 414 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 LYPLA2O95372 231 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 UTS2O95399 124 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 ASS1P00966 412 aaKnown RBP3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 OXTP01178 125 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 HBE1P02100 147 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 TACSTD2P09758 323 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 CSF3P09919 207 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 IGHV3-43DP0DP04 118 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 ZNF7P17097 686 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 HSD11B1P28845 292 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 CFHR2P36980 270 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 CD79BP40259 229 aa3.47□□□□□ -1.85
HMGB1P13-201ENST00000406019 ACTR1BP42025 376 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms