RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PTPN13Q12923 2485 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 SPTBN1Q01082 2364 aaKnown RBP18.36■□□□□ 0.53
TPM1-208ENST00000404484 M0R135 149 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 PIN1P1O15428 100 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 ZNHIT1O43257 154 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 SYNGR3O43761 229 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 TTRP02766 147 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 ANXA2P07355 339 aaKnown RBP18.36■□□□□ 0.53
TPM1-208ENST00000404484 ABOP16442 354 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 TPTEP56180 551 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 PER3P56645 1201 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 GALK2Q01415 458 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 TGFBR3Q03167 851 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 ANKRD16Q6P6B7 361 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 DRAM2Q6UX65 266 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 OR10AC1Q8NH08 325 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 NANOS1Q8WY41 292 aaKnown RBP18.36■□□□□ 0.53
TPM1-208ENST00000404484 ZNF799Q96GE5 643 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 CEP19Q96LK0 163 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 SLC24A3Q9HC58 644 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 CKLFQ9UBR5 152 aa18.36■□□□□ 0.53
TPM1-208ENST00000404484 USP9YO00507 2555 aaPredicted RBP18.36■□□□□ 0.53
TPM1-208ENST00000404484 A0A1B0GVI7 797 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 SMIM30A4D0T7 59 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 OR6C6A6NF89 314 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 NOTOA8MTQ0 251 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 F5H5K5 113 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 NCR1O76036 304 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 AGFG2O95081 481 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 ACSM4P0C7M7 580 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 ARR3P36575 388 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 HTR5AP47898 357 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 PSMD7P51665 324 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 DDI2Q5TDH0 399 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 SFXN4Q6P4A7 337 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 CD163Q86VB7 1156 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 CNEP1R1Q8N9A8 125 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 OR13C3Q8NGS6 347 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 ASB5Q8WWX0 329 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 PPP1R14AQ96A00 147 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 PGAM5Q96HS1 289 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 RNF121Q9H920 327 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 PLGRKTQ9HBL7 147 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 ERRFI1Q9UJM3 462 aaPredicted RBP18.35■□□□□ 0.53
TPM1-208ENST00000404484 ARHGAP21Q5T5U3 1957 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 HECTD1Q9ULT8 2610 aa18.35■□□□□ 0.53
TPM1-208ENST00000404484 ANKRD61A6NGH8 418 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 P2RY10O00398 339 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 RGS5O15539 181 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 SYT7O43581 403 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 MMP7P09237 267 aaPredicted RBP18.34■□□□□ 0.53
TPM1-208ENST00000404484 ZNF12P17014 697 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 CRYGSP22914 178 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 SLC6A9P48067 706 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 CAV3P56539 151 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 PSG4Q00888 419 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 DCTN2Q13561 401 aaKnown RBP18.34■□□□□ 0.53
TPM1-208ENST00000404484 C9orf135Q5VTT2 229 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 ZNF774Q6NX45 483 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 TMEM53Q6P2H8 277 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 CCDC54Q8NEL0 328 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 OR51A4Q8NGJ6 313 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 OR1K1Q8NGR3 316 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 BORCS5Q969J3 196 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 WNT5BQ9H1J7 359 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 SLC17A5Q9NRA2 495 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 CMAHPQ9Y471 501 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 FREM1Q5H8C1 2179 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 UBL3O95164 117 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 KIR2DL2P43627 348 aaPredicted RBP18.34■□□□□ 0.53
TPM1-208ENST00000404484 Q6ZT83 130 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 FAM57BQ71RH2 274 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 OR8B12Q8NGG6 310 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 OR52H1Q8NGJ2 320 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 WDFY2Q96P53 400 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 FOXJ3Q9UPW0 622 aa18.34■□□□□ 0.53
TPM1-208ENST00000404484 PCNX1Q96RV3 2341 aa18.33■□□□□ 0.53
TPM1-208ENST00000404484 ASH1LQ9NR48 2969 aaKnown RBP18.33■□□□□ 0.53
TPM1-208ENST00000404484 ICE1Q9Y2F5 2266 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 A0A096LPE4 126 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 A0A0U1RQV5 110 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 A0A1W2PPZ6 126 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 PRRG2O14669 202 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 IL18BPO95998 194 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 ITGA5P08648 1049 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 RNF224P0DH78 156 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 COX5BP10606 129 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 FSTP19883 344 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 MAGEB1P43366 347 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 PPP3R1P63098 170 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 KRTAP27-1Q3LI81 207 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 SPANXN2Q5MJ10 180 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 IDNKQ5T6J7 187 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 STAC2Q6ZMT1 411 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 PRSS45Q7RTY3 260 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 CCDC36Q8IYA8 594 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 AKR7LQ8NHP1 331 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 TP63Q9H3D4 680 aaPredicted RBP18.33■□□□□ 0.52
TPM1-208ENST00000404484 ZCCHC4Q9H5U6 513 aa18.33■□□□□ 0.52
TPM1-208ENST00000404484 ADAM30Q9UKF2 790 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms