RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 SPATC1Q76KD6 591 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 SPATA24Q86W54 205 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 AQP12AQ8IXF9 295 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 LNX2Q8N448 690 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 LINC00471Q8N535 108 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 BHLHE23Q8NDY6 225 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 GJC3Q8NFK1 279 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR2Z1Q8NG97 314 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR10AD1Q8NGE0 317 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR10S1Q8NGN2 331 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR2AJ1Q8NGZ0 328 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR2T4Q8NH00 348 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 GIPC3Q8TF64 312 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 ITLN1Q8WWA0 313 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 PTP4A1Q93096 173 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 SLCO4A1Q96BD0 722 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 OTULINQ96BN8 352 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 HAVCR1Q96D42 359 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 ELMOD3Q96FG2 381 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 C1orf159Q96HA4 380 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 DCLRE1CQ96SD1 692 aaKnown RBP4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 FEVQ99581 238 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 COQ7Q99807 217 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 RBM4Q9BWF3 364 aaKnown RBP4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 CDADC1Q9BWV3 514 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 HCAR1Q9BXC0 346 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 DGCR6LQ9BY27 220 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 CADM1Q9BY67 442 aaKnown RBP4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 TMPRSS13Q9BYE2 586 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 HDHD2Q9H0R4 259 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZNF665Q9H7R5 613 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 PNRC2Q9NPJ4 139 aaKnown RBP4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 TMEM160Q9NX00 188 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 UBAP1Q9NZ09 502 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 PDP1Q9P0J1 537 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 CYB5R1Q9UHQ9 305 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 TENM1Q9UKZ4 2725 aa4.88□□□□□ -1.63
HMGB1P20-201ENST00000402555 TCRBV3S1A0A5B6 114 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 RIIAD1A6NNX1 92 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 B4DSR2 109 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 CLDN25C9JDP6 229 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 H3BN98 237 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 EREGO14944 169 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 PHF1O43189 567 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 FKBP6O75344 327 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 E2F6O75461 281 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 DNAJC8O75937 253 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZNF205O95201 554 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 IFNA2P01563 188 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 IGHV2-5P01817 119 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 LCATP04180 440 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 CD55P08174 381 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 ADH4P08319 380 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 SPARCP09486 303 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 ACSM4P0C7M7 580 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 SLC2A1P11166 492 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 RAC2P15153 192 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZNF823P16415 610 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 SELEP16581 610 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 SPI1P17947 270 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 SRD5A1P18405 259 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 SRP14P37108 136 aaKnown RBP4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 LIPAP38571 399 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 SLC6A9P48067 706 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 RGS6P49758 472 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 PRKXP51817 358 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 DVL1P1P54792 670 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 CBX1P83916 185 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 SNAI3Q3KNW1 292 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 KRTAP27-1Q3LI81 207 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZMAT1Q5H9K5 638 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 ACSM5Q6NUN0 579 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 FDX2Q6P4F2 183 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 CD300LDQ6UXZ3 194 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 FBXW12Q6X9E4 464 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 COLCA1Q6ZS62 124 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 DCXRQ7Z4W1 244 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 GLCCI1Q86VQ1 547 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 C1orf174Q8IYL3 243 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 ATG16L2Q8NAA4 619 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR2T33Q8NG76 320 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR6K6Q8NGW6 343 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR2AE1Q8NHA4 323 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 TEX47Q8TBZ9 253 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 RAB1CQ92928 201 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 APOBEC3DQ96AK3 386 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 TIMD4Q96H15 378 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR2V2Q96R30 315 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 ATF6BQ99941 703 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 C1QTNF5Q9BXJ0 243 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 NMNAT2Q9BZQ4 307 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 EGLN1Q9GZT9 426 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 CYSLTR2Q9NS75 346 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 CENPMQ9NSP4 180 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 HIF1ANQ9NWT6 349 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 LPAR3Q9UBY5 353 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 CGGBP1Q9UFW8 167 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 ATPIF1Q9UII2 106 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 TMEFF2Q9UIK5 374 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZDHHC8Q9ULC8 765 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms