RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 VDAC3Q9Y277 283 aa18.69■□□□□ 0.58
CTCF-202ENST00000401394 C5orf63A6NC05 138 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 MYF5P13349 255 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 AIMP2Q13155 320 aaKnown RBP18.68■□□□□ 0.58
CTCF-202ENST00000401394 MICBQ29980 383 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 C1orf189Q5VU69 101 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 ANGPTL5Q86XS5 388 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 TRAV36DV7A0A075B6V5 113 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 FBXO24O75426 580 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 MELTFP08582 738 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 NME2P22392 152 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 SCAND1P57086 179 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 PLAC9Q5JTB6 97 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 ZNF585AQ6P3V2 769 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 FDX2Q6P4F2 183 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 KCTD18Q6PI47 426 aaPredicted RBP18.68■□□□□ 0.58
CTCF-202ENST00000401394 MAMDC2Q7Z304 686 aaPredicted RBP18.68■□□□□ 0.58
CTCF-202ENST00000401394 ZNF101Q8IZC7 436 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 TBL1XR1Q9BZK7 514 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 SLC2A4RGQ9NR83 387 aa18.68■□□□□ 0.58
CTCF-202ENST00000401394 H3BML4 177 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 FAM157CP0CG43 387 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 IL12BP29460 328 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 PPICP45877 212 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 ROM1Q03395 351 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 FZD2Q14332 565 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 SGCAQ16586 387 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 C9orf50Q5SZB4 431 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 C1orf140Q5VVS0 124 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 ADIPOR1Q96A54 375 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 TMEM230Q96A57 120 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 ACKR4Q9NPB9 350 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 R4GMQ9 66 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 IFNA6P05013 189 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 THEGLP0DJG4 465 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 CDAP32320 146 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 CTHP32929 405 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 FOXK1P85037 733 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 PDZK1IP1Q13113 114 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 ZNF813Q6ZN06 617 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 SLC16A13Q7RTY0 426 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 LYPD6Q86Y78 171 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 BAP18Q8IXM2 172 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 ZNF440Q8IYI8 595 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 ST7LQ8TDW4 575 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 SMIM3Q9BZL3 60 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 C5orf66Q9H5L9 145 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 COA4Q9NYJ1 87 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 PLA2G2EQ9NZK7 142 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 CYP8B1Q9UNU6 501 aa18.67■□□□□ 0.58
CTCF-202ENST00000401394 PLPP3O14495 311 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 TPPPO94811 219 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 IGHV4-34P06331 123 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 ANKRD55Q3KP44 614 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 TMPRSS9Q7Z410 1059 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 GALNTL5Q7Z4T8 443 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 COMMD2Q86X83 199 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 S1PR5Q9H228 398 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 TXNIPQ9H3M7 391 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 LANCL2Q9NS86 450 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 PRODH2Q9UF12 536 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 C5orf67F2Z3F1 127 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 MPIG6BO95866 241 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 HOXB5P09067 269 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 GLO1Q04760 184 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 AWAT2Q6E213 333 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 OR4K15Q8NH41 348 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 PRRT1Q99946 306 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 SLC17A5Q9NRA2 495 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 NSA2O95478 260 aaKnown RBP18.66■□□□□ 0.58
CTCF-202ENST00000401394 DDAH2O95865 285 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 IL2RAP01589 272 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 TTRP02766 147 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 DAOP14920 347 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 OR3A4PP47883 348 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 S100A10P60903 97 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 POU3F1Q03052 451 aaPredicted RBP18.66■□□□□ 0.58
CTCF-202ENST00000401394 MFAP5Q13361 173 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 SGCBQ16585 318 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 LANCL3Q6ZV70 420 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 OR51E1Q8TCB6 317 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 ADAMTS18Q8TE60 1221 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 UQCC1Q9NVA1 299 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 ZNF319Q9P2F9 582 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 CTSFQ9UBX1 484 aa18.66■□□□□ 0.58
CTCF-202ENST00000401394 KLF2Q9Y5W3 355 aaPredicted RBP18.66■□□□□ 0.58
CTCF-202ENST00000401394 THADAQ6YHU6 1953 aa18.65■□□□□ 0.58
CTCF-202ENST00000401394 ZNF823P16415 610 aa18.65■□□□□ 0.58
CTCF-202ENST00000401394 GLRA1P23415 457 aa18.65■□□□□ 0.58
CTCF-202ENST00000401394 AKT2P31751 481 aa18.65■□□□□ 0.58
CTCF-202ENST00000401394 EBPQ15125 230 aaKnown RBP18.65■□□□□ 0.58
CTCF-202ENST00000401394 ZNF721Q8TF20 911 aa18.65■□□□□ 0.58
CTCF-202ENST00000401394 ST6GALNAC5Q9BVH7 336 aa18.65■□□□□ 0.58
CTCF-202ENST00000401394 SCPEP1Q9HB40 452 aa18.65■□□□□ 0.58
CTCF-202ENST00000401394 LRP3O75074 770 aa18.65■□□□□ 0.58
CTCF-202ENST00000401394 TMEM127O75204 238 aa18.65■□□□□ 0.58
CTCF-202ENST00000401394 GABRG2P18507 467 aa18.65■□□□□ 0.58
CTCF-202ENST00000401394 LPAR6P43657 344 aa18.65■□□□□ 0.58
CTCF-202ENST00000401394 SNRPEP62304 92 aaKnown RBP18.65■□□□□ 0.58
CTCF-202ENST00000401394 RAB32Q13637 225 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms