RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 PCBD2Q9H0N5 130 aa13.51□□□□□ -0.25
CYLD-202ENST00000398568 RAB18Q9NP72 206 aa13.51□□□□□ -0.25
CYLD-202ENST00000398568 PRODH2Q9UF12 536 aa13.51□□□□□ -0.25
CYLD-202ENST00000398568 LSM7Q9UK45 103 aaKnown RBP13.51□□□□□ -0.25
CYLD-202ENST00000398568 NCOR1O75376 2440 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 CLEC3AO75596 197 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 TRGC2P03986 189 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 RASGEF1BQ0VAM2 473 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 ZNHIT3Q15649 155 aaPredicted RBP13.5□□□□□ -0.25
CYLD-202ENST00000398568 OPN5Q6U736 354 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 FJX1Q86VR8 437 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 BHLHE23Q8NDY6 225 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 ZNF461Q8TAF7 563 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 MARCH1Q8TCQ1 289 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 DTD2Q96FN9 168 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 BSCL2Q96G97 398 aaPredicted RBP13.5□□□□□ -0.25
CYLD-202ENST00000398568 PTCHD1Q96NR3 888 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 ZNF724A8MTY0 619 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 NID1P14543 1247 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 UBE2KP61086 200 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 TMEM35AQ53FP2 167 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 SLC48A1Q6P1K1 146 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 LEG1Q6P5S2 330 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 NPEPL1Q8NDH3 523 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 STACQ99469 402 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 C5orf67F2Z3F1 127 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 K7EPK0 472 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 SOX15O60248 233 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 VASPP50552 380 aaPredicted RBP13.5□□□□□ -0.25
CYLD-202ENST00000398568 GLYATL3Q5SZD4 288 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 FAM71E2Q8N5Q1 922 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 VN1R2Q8NFZ6 395 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 C2orf50Q96LR7 162 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 OR14J1Q9UGF5 321 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 SLCO1B1Q9Y6L6 691 aa13.5□□□□□ -0.25
CYLD-202ENST00000398568 SFTPBP07988 381 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 LYL1P12980 280 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 PAX1P15863 534 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 HIST1H1TP22492 207 aaPredicted RBP13.49□□□□□ -0.25
CYLD-202ENST00000398568 CEBPGP53567 150 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 ZNF684Q5T5D7 378 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 LANCL3Q6ZV70 420 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 OR13D1Q8NGV5 346 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 LYPD6BQ8NI32 183 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 MACROD1Q9BQ69 325 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 MTCH2Q9Y6C9 303 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 A0A0A6YYH2 397 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 A6NJ64 397 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 M0R143 59 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 ELFN1P0C7U0 828 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 THEGLP0DJG4 465 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 RPL12P30050 165 aaKnown RBP13.49□□□□□ -0.25
CYLD-202ENST00000398568 HRH1P35367 487 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 FAM3AP98173 230 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 HYAL1Q12794 435 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 TMEM128Q5BJH2 165 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 TMEM268Q5VZI3 342 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 RASD2Q96D21 266 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 R3HDM4Q96D70 268 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 MVB12AQ96EY5 273 aa13.49□□□□□ -0.25
CYLD-202ENST00000398568 A0A1B0GV50 99 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 FCGR2CP31995 323 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 HNRNPKP61978 463 aaKnown RBP eCLIP13.48□□□□□ -0.25
CYLD-202ENST00000398568 TFF2Q03403 129 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 ZNF343Q6P1L6 599 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 ADGRE4PQ86SQ3 457 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 FAM219AQ8IW50 185 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 GPR137CQ8N3F9 429 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 ZNF664Q8N3J9 261 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 SNIP1Q8TAD8 396 aaKnown RBP13.48□□□□□ -0.25
CYLD-202ENST00000398568 Q8WTZ3 238 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 SLC25A43Q8WUT9 341 aaPredicted RBP13.48□□□□□ -0.25
CYLD-202ENST00000398568 YPEL4Q96NS1 127 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 EPHX3Q9H6B9 360 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 MKKSQ9NPJ1 570 aaPredicted RBP13.48□□□□□ -0.25
CYLD-202ENST00000398568 FBXL17Q9UF56 701 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 FBXL21Q9UKT6 434 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 A0A1B0GWA3 101 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 C9J4A7 227 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 LEFTY1O75610 366 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 TRGC1P0CF51 173 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 CD200P41217 278 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 AFF3P51826 1226 aaKnown RBP13.48□□□□□ -0.25
CYLD-202ENST00000398568 JOSD1Q15040 202 aaPredicted RBP13.48□□□□□ -0.25
CYLD-202ENST00000398568 ALG10BQ5I7T1 473 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 DPY19L2P2Q6ZN68 376 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 JAGN1Q8N5M9 183 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 OR10J5Q8NHC4 309 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 ZPLD1Q8TCW7 415 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 MCHR2Q969V1 340 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 GUCD1Q96NT3 240 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 MDC1Q14676 2089 aaKnown RBP13.48□□□□□ -0.25
CYLD-202ENST00000398568 A0A087WUJ7 227 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 PEX12O00623 359 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 DVL1O14640 695 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 LILRB3O75022 631 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 GAPDHP04406 335 aaKnown RBP13.48□□□□□ -0.25
CYLD-202ENST00000398568 CXCL1P09341 107 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 FCARP24071 287 aa13.48□□□□□ -0.25
CYLD-202ENST00000398568 PHF19Q5T6S3 580 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms