RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 TMEM123Q8N131 208 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 TMEM217Q8N7C4 229 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 FLVCR1-AS1Q8TAF5 88 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 PPP1R1CQ8WVI7 109 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 ALG12Q9BV10 488 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 SHARPINQ9H0F6 387 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 KCNG2Q9UJ96 466 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 LOC100289279A0A1B0GTE1 492 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 ZFP92A6NM28 416 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 PIN1P1O15428 100 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 CA11O75493 328 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 TMEM225BP0DP42 221 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 DAOP14920 347 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 DPP4P27487 766 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 CCR5P51681 352 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 LIPNQ5VXI9 398 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 MUC20Q8N307 709 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF511Q8NB15 262 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF296Q8WUU4 475 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 ISOC2Q96AB3 205 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 IGFLR1Q9H665 355 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 C1orf123Q9NWV4 160 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 FLRT3Q9NZU0 649 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 ARID1AO14497 2285 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 CD74P04233 296 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 HNRNPA2B1P22626 353 aaKnown RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 PSMB6P28072 239 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 GPR3P46089 330 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 ALKBH1Q13686 389 aaKnown RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 OR2B11Q5JQS5 317 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 FAM78AQ5JUQ0 283 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 TEX30Q5JUR7 227 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 FBXW12Q6X9E4 464 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 IL34Q6ZMJ4 242 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF704Q6ZNC4 412 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 NPEPL1Q8NDH3 523 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 OR56B2PQ8NGI1 322 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 DCBLD2Q96PD2 775 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 OR8B4Q96RC9 309 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 SELENOIQ9C0D9 397 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 SLC25A31Q9H0C2 315 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 C1orf198Q9H425 327 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 C20orf141Q9NUB4 165 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 SERTAD4Q9NUC0 356 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 ING1Q9UK53 422 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 PCDHGA5Q9Y5G8 931 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 TMEM218A2RU14 115 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 H0YGG7 62 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 GATCO43716 136 aaKnown RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 IGLV3-19P01714 112 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 HPXP02790 462 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 POU3F2P20265 443 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 LAP3P28838 519 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 PTGFRP43088 359 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 GPR18Q14330 331 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 PRICKLE4Q2TBC4 344 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 C11orf87Q6NUJ2 197 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 TMEM184AQ6ZMB5 413 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 CSNK1A1LQ8N752 337 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 CCDC71LQ8N9Z2 235 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 OR11H4Q8NGC9 324 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 OR2G3Q8NGZ4 309 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 HSD17B8Q92506 261 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 BSCL2Q96G97 398 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 SDSLQ96GA7 329 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 KIRREL1Q96J84 757 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 GHRLQ9UBU3 117 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 LINC01553A4QN01 128 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF354AO60765 605 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 NPIPB7O75200 414 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 CCL5P13501 91 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 KIR2DL1P43626 348 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 FASLGP48023 281 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 SGCBQ16585 318 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 CLEC12BQ2HXU8 276 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 VWA2Q5GFL6 755 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 PHF19Q5T6S3 580 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 ADGRE4PQ86SQ3 457 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 BAGE3Q86Y29 109 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 BAGE2Q86Y30 109 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 ZFP62Q8NB50 900 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 GPBAR1Q8TDU6 330 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 SLC46A1Q96NT5 459 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 CA10Q9NS85 328 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 PLEKHJ1Q9NW61 149 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 KLRF1Q9NZS2 232 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 HHLA2Q9UM44 414 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 FOXJ3Q9UPW0 622 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 A0A087X0M5 115 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 A0A1B0GX30 115 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 LANCL1O43813 399 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 SLC16A7O60669 478 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 EIF3GO75821 320 aaKnown RBP eCLIP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 F10P00742 488 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF25P17030 456 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 MSR1P21757 451 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 SUMO3P55854 103 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 DUSP2Q05923 314 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 PJVKQ0ZLH3 352 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 OR2A2Q6IF42 318 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms