RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 H3BMQ9 156 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 CD5LO43866 347 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 ENTPD6O75354 484 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 INMTO95050 263 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 SCG5P05408 212 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 ALDH3B1P43353 468 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 NR4A2P43354 598 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 GP2P55259 537 aaKnown RBP12.48□□□□□ -0.41
SEC13-208ENST00000397109 AQP6Q13520 282 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 NKPD1Q17RQ9 610 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 KRTAP21-3Q3LHN1 58 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 ZNF718Q3SXZ3 478 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 ACSM5Q6NUN0 579 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 ZNF774Q6NX45 483 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 LINC00299Q6ZSB3 139 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 SNX33Q8WV41 574 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 TMEM80Q96HE8 168 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 COG8Q96MW5 612 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 FOXN4Q96NZ1 517 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 FUNDC2Q9BWH2 189 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 TPK1Q9H3S4 243 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 EMC7Q9NPA0 242 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 CMC2Q9NRP2 79 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 TAAR3PQ9P1P4 343 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 WARS2Q9UGM6 360 aaKnown RBP12.48□□□□□ -0.41
SEC13-208ENST00000397109 ENPP5Q9UJA9 477 aa12.48□□□□□ -0.41
SEC13-208ENST00000397109 YLPM1P49750 1951 aaKnown RBP12.48□□□□□ -0.41
SEC13-208ENST00000397109 VGLL3A8MV65 326 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 SLC22A1O15245 554 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 SGCEO43556 437 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 ICMTO60725 284 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 MT-ND5P03915 603 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 HIST1H1CP16403 213 aaKnown RBP12.47□□□□□ -0.41
SEC13-208ENST00000397109 GIFP27352 417 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 GCH1P30793 250 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.47□□□□□ -0.41
SEC13-208ENST00000397109 RAB40BQ12829 278 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 DYNC1I2Q13409 638 aaKnown RBP12.47□□□□□ -0.41
SEC13-208ENST00000397109 KCNMB1Q16558 191 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 TMEM249Q2WGJ8 235 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 LEG1Q6P5S2 330 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 ZNF367Q7RTV3 350 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 IQCF1Q8N6M8 205 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 YIPF6Q96EC8 236 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 C4orf45Q96LM5 186 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 IL4I1Q96RQ9 567 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 DDOQ99489 341 aa12.47□□□□□ -0.41
SEC13-208ENST00000397109 MYEF2Q9P2K5 600 aaKnown RBP12.47□□□□□ -0.41
SEC13-208ENST00000397109 SURF4O15260 269 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 PRKYO43930 277 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 DOK2O60496 412 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 GABARAPO95166 117 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 FADS2O95864 444 aaKnown RBP12.46□□□□□ -0.41
SEC13-208ENST00000397109 IGHV3-13P01766 116 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 DBTP11182 482 aaKnown RBP12.46□□□□□ -0.41
SEC13-208ENST00000397109 TUBG1P23258 451 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 C21orf33P30042 268 aaPredicted RBP12.46□□□□□ -0.41
SEC13-208ENST00000397109 WNT5AP41221 380 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 HTR5AP47898 357 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 CENPAP49450 140 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 ERVS71-1P61550 626 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 NXNL2Q5VZ03 156 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 NPEPL1Q8NDH3 523 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 PROKR2Q8NFJ6 384 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 OR4K13Q8NH42 304 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 PLEKHA8Q96JA3 519 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 NMNAT3Q96T66 252 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 SRA1Q9HD15 236 aaKnown RBP12.46□□□□□ -0.41
SEC13-208ENST00000397109 FGF20Q9NP95 211 aaPredicted RBP12.46□□□□□ -0.41
SEC13-208ENST00000397109 HINT3Q9NQE9 182 aaKnown RBP12.46□□□□□ -0.41
SEC13-208ENST00000397109 TUBG2Q9NRH3 451 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 PLEK2Q9NYT0 353 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 KLHL21Q9UJP4 597 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 DIMT1Q9UNQ2 313 aaKnown RBP12.46□□□□□ -0.41
SEC13-208ENST00000397109 B9D1Q9UPM9 204 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 ERGIC3Q9Y282 383 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 POLR1DQ9Y2S0 133 aa12.46□□□□□ -0.41
SEC13-208ENST00000397109 C17orf100A8MU93 164 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 INAFM1C9JVW0 142 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 MPZL1O95297 269 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 IFNGP01579 166 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 GZMKP49863 264 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 PPP1CBP62140 327 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 MRPS11P82912 194 aaKnown RBP12.46□□□□□ -0.42
SEC13-208ENST00000397109 GLO1Q04760 184 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 GGTLC2Q14390 218 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 PCGF3Q3KNV8 242 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 MBNL2Q5VZF2 373 aaKnown RBP12.46□□□□□ -0.42
SEC13-208ENST00000397109 CYB5R2Q6BCY4 276 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 VASH1Q7L8A9 365 aaPredicted RBP12.46□□□□□ -0.42
SEC13-208ENST00000397109 GID4Q8IVV7 300 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 ZNF101Q8IZC7 436 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 OR6V1Q8N148 313 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 ABHD4Q8TB40 342 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 MARS2Q96GW9 593 aaKnown RBP12.46□□□□□ -0.42
SEC13-208ENST00000397109 ZNF582Q96NG8 517 aaPredicted RBP12.46□□□□□ -0.42
SEC13-208ENST00000397109 TSSK2Q96PF2 358 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 BPESC1Q9GZL8 116 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 AMBNQ9NP70 447 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 YAE1D1Q9NRH1 226 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms