RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 CDC42EP2O14613 210 aa14.53□□□□□ -0.08
EXOSC3-202ENST00000396521 MRASO14807 208 aa14.53□□□□□ -0.08
EXOSC3-202ENST00000396521 MMP9P14780 707 aa14.53□□□□□ -0.08
EXOSC3-202ENST00000396521 RAD23AP54725 363 aa14.53□□□□□ -0.08
EXOSC3-202ENST00000396521 COX10Q12887 443 aa14.53□□□□□ -0.08
EXOSC3-202ENST00000396521 MAB21L1Q13394 359 aa14.53□□□□□ -0.08
EXOSC3-202ENST00000396521 LYPD2Q6UXB3 125 aa14.53□□□□□ -0.08
EXOSC3-202ENST00000396521 CYP4Z1Q86W10 505 aa14.53□□□□□ -0.08
EXOSC3-202ENST00000396521 LDLRAD3Q86YD5 345 aa14.53□□□□□ -0.08
EXOSC3-202ENST00000396521 BHLHE23Q8NDY6 225 aa14.53□□□□□ -0.08
EXOSC3-202ENST00000396521 LINC01006Q8NI28 216 aa14.53□□□□□ -0.08
EXOSC3-202ENST00000396521 TECTBQ96PL2 329 aa14.53□□□□□ -0.08
EXOSC3-202ENST00000396521 NUAK2Q9H093 628 aa14.53□□□□□ -0.08
EXOSC3-202ENST00000396521 TCF7L1Q9HCS4 588 aa14.53□□□□□ -0.08
EXOSC3-202ENST00000396521 CAB39Q9Y376 341 aaPredicted RBP14.53□□□□□ -0.08
EXOSC3-202ENST00000396521 IGHV1-69DA0A0B4J2H0 117 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 LGALS8O00214 317 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 FFAR1O14842 300 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 GPR137BO60478 399 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 GMDSO60547 372 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 PTP4A3O75365 173 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 PTBP3O95758 552 aaKnown RBP14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 TXNDC12O95881 172 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 IGHV1-69P01742 117 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 GPR4P46093 362 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 YAP1P46937 504 aaKnown RBP14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 RPS6KA3P51812 740 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 PROK1P58294 105 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 SLC36A3Q495N2 470 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 CLEC12AQ5QGZ9 265 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 FAM201AQ5SY85 155 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 DPY19L2P2Q6ZN68 376 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 ARPINQ7Z6K5 226 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 SPERTQ8NA61 448 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 NPRL2Q8WTW4 380 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 SPRYD4Q8WW59 207 aaPredicted RBP14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 KRCC1Q9NPI7 259 aaPredicted RBP14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 RHCGQ9UBD6 479 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 SIGLEC7Q9Y286 467 aa14.52□□□□□ -0.09
EXOSC3-202ENST00000396521 PRKDCP78527 4128 aaKnown RBP14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 C5orf63A6NC05 138 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 EDF1O60869 148 aaKnown RBP14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 FAM20BO75063 409 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 HLA-DPB1P04440 258 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 SFTPBP07988 381 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 MDH1P40925 334 aaKnown RBP14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 IER3P46695 156 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 MZT1Q08AG7 82 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 GK2Q14410 553 aaPredicted RBP14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 C2orf68Q2NKX9 166 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 KRTAP27-1Q3LI81 207 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 IFI44LQ53G44 452 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 PGAP1Q75T13 922 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 ZSCAN4Q8NAM6 433 aaPredicted RBP14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 TBX15Q96SF7 602 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 MMADHCQ9H3L0 296 aaPredicted RBP14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 C16orf95Q9H693 158 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 TMCC3Q9ULS5 477 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 AURKCQ9UQB9 309 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 SNX13Q9Y5W8 968 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 LHFPL6Q9Y693 200 aa14.51□□□□□ -0.09
EXOSC3-202ENST00000396521 IGHV3-64DA0A0J9YX35 117 aa14.5□□□□□ -0.09
EXOSC3-202ENST00000396521 A0A1W2PRQ8 180 aa14.5□□□□□ -0.09
EXOSC3-202ENST00000396521 J3KTA2 159 aa14.5□□□□□ -0.09
EXOSC3-202ENST00000396521 TROVE2P10155 538 aaKnown RBP eCLIP14.5□□□□□ -0.09
EXOSC3-202ENST00000396521 ZNF26P17031 533 aaPredicted RBP14.5□□□□□ -0.09
EXOSC3-202ENST00000396521 DGCR6Q14129 220 aa14.5□□□□□ -0.09
EXOSC3-202ENST00000396521 OR8G1Q15617 311 aa14.5□□□□□ -0.09
EXOSC3-202ENST00000396521 RUSC1-AS1Q66K80 236 aa14.5□□□□□ -0.09
EXOSC3-202ENST00000396521 FKBP9P1Q75LS8 142 aa14.5□□□□□ -0.09
EXOSC3-202ENST00000396521 RPS6KA6Q9UK32 745 aa14.5□□□□□ -0.09
EXOSC3-202ENST00000396521 FAM96BQ9Y3D0 163 aa14.5□□□□□ -0.09
EXOSC3-202ENST00000396521 KPTNQ9Y664 436 aa14.5□□□□□ -0.09
EXOSC3-202ENST00000396521 BTBD17A6NE02 478 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 SOCS2O14508 198 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 IMPA2O14732 288 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 ADAM20O43506 726 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 PPP1R3DO95685 299 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 ACSM4P0C7M7 580 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 CENPAP49450 140 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 TPTEP56180 551 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 RSPO1Q2MKA7 263 aaPredicted RBP14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 FBLN7Q53RD9 439 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 TBPL2Q6SJ96 375 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 MRPL21Q7Z2W9 205 aaKnown RBP14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 VTCN1Q7Z7D3 282 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 SCCPDHQ8NBX0 429 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 OR2AJ1Q8NGZ0 328 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 SLC7A13Q8TCU3 470 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 PITX2Q99697 317 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 ATF6BQ99941 703 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 SIRPDQ9H106 197 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 CCDC134Q9H6E4 229 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 WDR76Q9H967 626 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 UFSP2Q9NUQ7 469 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 FGFR1OP2Q9NVK5 253 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 KAAG1Q9UBP8 84 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 KCNG2Q9UJ96 466 aa14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 FAM32AQ9Y421 112 aaKnown RBP14.49□□□□□ -0.09
EXOSC3-202ENST00000396521 IER3IP1Q9Y5U9 82 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms