RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 OIP5O43482 229 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 SLC25A12O75746 678 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 CD8AP01732 235 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 IGHV2-5P01817 119 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 ZNF44P15621 663 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 BDKRB2P30411 391 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 MLF1P58340 268 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 MRPS10P82664 201 aaKnown RBP4.78□□□□□ -1.64
VPS41-203ENST00000395969 LTBQ06643 244 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 SRSF4Q08170 494 aaKnown RBP4.78□□□□□ -1.64
VPS41-203ENST00000395969 RBM39Q14498 530 aaKnown RBP4.78□□□□□ -1.64
VPS41-203ENST00000395969 SSPNQ14714 243 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 TGIF1Q15583 401 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 PLPPR5Q32ZL2 321 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 ACSM3Q53FZ2 586 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 ZNF542PQ5EBM4 170 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 PWWP2BQ6NUJ5 590 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 RPL22L1Q6P5R6 122 aaKnown RBP4.78□□□□□ -1.64
VPS41-203ENST00000395969 TSSK4Q6SA08 328 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 THSD4Q6ZMP0 1018 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 NDUFAF7Q7L592 441 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 LINGO2Q7L985 606 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 CPOQ8IVL8 374 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 OR4N5Q8IXE1 308 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 IZUMO1Q8IYV9 350 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 GTPBP8Q8N3Z3 284 aaPredicted RBP4.78□□□□□ -1.64
VPS41-203ENST00000395969 TMEM99Q8N816 258 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 OR4N2Q8NGD1 307 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 PFN4Q8NHR9 129 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 PTX4Q96A99 478 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 S100PBPQ96BU1 408 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 SLC25A38Q96DW6 304 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 PTCHD1Q96NR3 888 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 GINS4Q9BRT9 223 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 TXNIPQ9H3M7 391 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 TMEM231Q9H6L2 316 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 PROK2Q9HC23 129 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 SLC17A5Q9NRA2 495 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 ANKRD10Q9NXR5 420 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 ALKBH4Q9NXW9 302 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 MYOTQ9UBF9 498 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 B3GALT5Q9Y2C3 310 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 IGLV1-36A0A0B4J1U3 117 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 UBE2QL1A1L167 161 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 RIIAD1A6NNX1 92 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 PLPP3O14495 311 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 GOSR2O14653 212 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 BCL2L11O43521 198 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 SOX15O60248 233 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 SCRG1O75711 98 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 TNFRSF6BO95407 300 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 ACTL6AO96019 429 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 DCNP07585 359 aaKnown RBP4.78□□□□□ -1.64
VPS41-203ENST00000395969 AGAP20933 346 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 AGTR1P30556 359 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 PMELP40967 661 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 PPT1P50897 306 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 HCCSP53701 268 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 SLC16A1P53985 500 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 UBE2MP61081 183 aaKnown RBP4.78□□□□□ -1.64
VPS41-203ENST00000395969 RPS11P62280 158 aaKnown RBP eCLIP4.78□□□□□ -1.64
VPS41-203ENST00000395969 SORDQ00796 357 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 CDK5R1Q15078 307 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 CDNFQ49AH0 187 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 BEX5Q5H9J7 111 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 ARL9Q6T311 187 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 MAMDC2Q7Z304 686 aaPredicted RBP4.78□□□□□ -1.64
VPS41-203ENST00000395969 MUC20Q8N307 709 aaPredicted RBP4.78□□□□□ -1.64
VPS41-203ENST00000395969 SUMF1Q8NBK3 374 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 SLC38A9Q8NBW4 561 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 OR2M3Q8NG83 312 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 OR51G2Q8NGK0 314 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 LGALS14Q8TCE9 139 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 GPR148Q8TDV2 347 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 FCAMRQ8WWV6 532 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 GCDHQ92947 438 aaPredicted RBP4.78□□□□□ -1.64
VPS41-203ENST00000395969 SMIM19Q96E16 107 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 SSX3Q99909 188 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 SF3B5Q9BWJ5 86 aaKnown RBP4.78□□□□□ -1.64
VPS41-203ENST00000395969 PRO1933Q9H354 126 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 GP6Q9HCN6 339 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 KLHL1Q9NR64 748 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 TMEM100Q9NV29 134 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 ZNF107Q9UII5 783 aaPredicted RBP4.78□□□□□ -1.64
VPS41-203ENST00000395969 PTPRBP23467 1997 aa4.78□□□□□ -1.64
VPS41-203ENST00000395969 LOC390937A0A1W2PQ73 354 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 IDSB3KWA1 339 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 OR2F2O95006 317 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 MT-ND5P03915 603 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 CD79AP11912 226 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 SLC25A4P12235 298 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 BMP7P18075 431 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 CCL1P22362 96 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 NFYBP25208 207 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 DPP4P27487 766 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 GSK3AP49840 483 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 PRKAG1P54619 331 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 RAC1P63000 192 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 BLOC1S1P78537 153 aa4.77□□□□□ -1.65
VPS41-203ENST00000395969 OR2F1Q13607 317 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms