RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 C20orf144Q9BQM9 153 aa8□□□□□ -1.13
MSH5-205ENST00000395853 TPSD1Q9BZJ3 242 aa8□□□□□ -1.13
MSH5-205ENST00000395853 ADAM29Q9UKF5 820 aa8□□□□□ -1.13
MSH5-205ENST00000395853 KMT2BQ9UMN6 2715 aaPredicted RBP8□□□□□ -1.13
MSH5-205ENST00000395853 HEPACAM2A8MVW5 462 aa8□□□□□ -1.13
MSH5-205ENST00000395853 GEMIN2O14893 280 aaKnown RBP8□□□□□ -1.13
MSH5-205ENST00000395853 HYAL3O43820 417 aaPredicted RBP8□□□□□ -1.13
MSH5-205ENST00000395853 ATP1B1P05026 303 aa8□□□□□ -1.13
MSH5-205ENST00000395853 ST6GAL1P15907 406 aa8□□□□□ -1.13
MSH5-205ENST00000395853 CCNOP22674 350 aa8□□□□□ -1.13
MSH5-205ENST00000395853 RPL4P36578 427 aaKnown RBP8□□□□□ -1.13
MSH5-205ENST00000395853 LPAR6P43657 344 aa8□□□□□ -1.13
MSH5-205ENST00000395853 GABRA4P48169 554 aa8□□□□□ -1.13
MSH5-205ENST00000395853 RAB28P51157 221 aa8□□□□□ -1.13
MSH5-205ENST00000395853 BTNL8Q6UX41 500 aa8□□□□□ -1.13
MSH5-205ENST00000395853 Q6ZNB5 142 aa8□□□□□ -1.13
MSH5-205ENST00000395853 COLCA1Q6ZS62 124 aa8□□□□□ -1.13
MSH5-205ENST00000395853 ESPNLQ6ZVH7 1005 aa8□□□□□ -1.13
MSH5-205ENST00000395853 WFDC8Q8IUA0 241 aa8□□□□□ -1.13
MSH5-205ENST00000395853 OR52I2Q8NH67 350 aa8□□□□□ -1.13
MSH5-205ENST00000395853 MCHR2Q969V1 340 aa8□□□□□ -1.13
MSH5-205ENST00000395853 EID2BQ96D98 161 aa8□□□□□ -1.13
MSH5-205ENST00000395853 RAB39BQ96DA2 213 aa8□□□□□ -1.13
MSH5-205ENST00000395853 REEP6Q96HR9 211 aa8□□□□□ -1.13
MSH5-205ENST00000395853 APOLD1Q96LR9 279 aa8□□□□□ -1.13
MSH5-205ENST00000395853 LYSMD1Q96S90 227 aa8□□□□□ -1.13
MSH5-205ENST00000395853 CCDC3Q9BQI4 270 aa8□□□□□ -1.13
MSH5-205ENST00000395853 FOXQ1Q9C009 403 aa8□□□□□ -1.13
MSH5-205ENST00000395853 SLCO5A1Q9H2Y9 848 aa8□□□□□ -1.13
MSH5-205ENST00000395853 CNTD2Q9H8S5 307 aa8□□□□□ -1.13
MSH5-205ENST00000395853 IL36AQ9UHA7 158 aa8□□□□□ -1.13
MSH5-205ENST00000395853 OSGIN2Q9Y236 505 aa8□□□□□ -1.13
MSH5-205ENST00000395853 MRPS17Q9Y2R5 130 aaKnown RBP8□□□□□ -1.13
MSH5-205ENST00000395853 PIKFYVEQ9Y2I7 2098 aa8□□□□□ -1.13
MSH5-205ENST00000395853 CACNA1IQ9P0X4 2223 aa8□□□□□ -1.13
MSH5-205ENST00000395853 TRAV30A0A087WSZ9 112 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 LOC102724200A0A096LPH7 203 aaPredicted RBP7.99□□□□□ -1.13
MSH5-205ENST00000395853 LOC100289279A0A1B0GTE1 492 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 TLX3O43711 291 aaPredicted RBP7.99□□□□□ -1.13
MSH5-205ENST00000395853 OR10J1P30954 320 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 MC4RP32245 332 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 CAMLGP49069 296 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 GAS1P54826 345 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 RHOAP61586 193 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 ST8SIA6P61647 398 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 H3F3AP84243 136 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 CDK5Q00535 292 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 RAB40BQ12829 278 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 PTPRNQ16849 979 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 C5orf64Q2M2E5 130 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 ZNF343Q6P1L6 599 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 TMEM144Q7Z5S9 345 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 CELF5Q8N6W0 485 aaKnown RBP7.99□□□□□ -1.13
MSH5-205ENST00000395853 OR10H4Q8NGA5 316 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 OR1P1Q8NH06 330 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 SFXN5Q8TD22 340 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 ADAMTS17Q8TE56 1095 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 PPCDCQ96CD2 204 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 GPR21Q99679 349 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 DOHHQ9BU89 302 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 SMG9Q9H0W8 520 aaKnown RBP7.99□□□□□ -1.13
MSH5-205ENST00000395853 MEGF9Q9H1U4 602 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 ZNF552Q9H707 407 aaPredicted RBP7.99□□□□□ -1.13
MSH5-205ENST00000395853 Q9N2J8 555 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 KCNJ16Q9NPI9 418 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 THSD1Q9NS62 852 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 ST3GAL6Q9Y274 331 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 ZNF337Q9Y3M9 751 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 COX11Q9Y6N1 276 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 URGCP-MRPS24S4R325 110 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 CEP250Q9BV73 2442 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 TGIF2-C20orf24A0A0A6YYL0 155 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 MGAT4DA6NG13 374 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 PPP5D1E7EU14 171 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 CSF1P09603 554 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 CCKARP32238 428 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 LGALS7P47929 136 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 RANP62826 216 aaKnown RBP7.99□□□□□ -1.13
MSH5-205ENST00000395853 TGM3Q08188 693 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 SPOCK1Q08629 439 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 ST3GAL3Q11203 375 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 HNRNPA1L2Q32P51 320 aaKnown RBP7.99□□□□□ -1.13
MSH5-205ENST00000395853 PODNL1Q6PEZ8 512 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 FBXW12Q6X9E4 464 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 TSEN54Q7Z6J9 526 aaKnown RBP7.99□□□□□ -1.13
MSH5-205ENST00000395853 OR56A1Q8NGH5 318 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 CXorf40AQ8TE69 158 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 PPP1R1CQ8WVI7 109 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 FCAMRQ8WWV6 532 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 C11orf40Q8WZ69 217 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 TMEM18Q96B42 140 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 JSRP1Q96MG2 331 aaPredicted RBP7.99□□□□□ -1.13
MSH5-205ENST00000395853 CIB3Q96Q77 187 aaPredicted RBP7.99□□□□□ -1.13
MSH5-205ENST00000395853 ATOH8Q96SQ7 321 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 ATP6V0BQ99437 205 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 SMAD5Q99717 465 aaKnown RBP7.99□□□□□ -1.13
MSH5-205ENST00000395853 FGF20Q9NP95 211 aaPredicted RBP7.99□□□□□ -1.13
MSH5-205ENST00000395853 KLK11Q9UBX7 282 aa7.99□□□□□ -1.13
MSH5-205ENST00000395853 FOXD3Q9UJU5 478 aaPredicted RBP7.99□□□□□ -1.13
MSH5-205ENST00000395853 DCHS1Q96JQ0 3298 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms