RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CTSZQ9UBR2 303 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 IER3IP1Q9Y5U9 82 aa17.52■□□□□ 0.4
TRAF4-203ENST00000394925 LOC100653049A0A140TA62 436 aa17.51■□□□□ 0.39
TRAF4-203ENST00000394925 BBIP1A8MTZ0 92 aa17.51■□□□□ 0.39
TRAF4-203ENST00000394925 GPR137BO60478 399 aa17.51■□□□□ 0.39
TRAF4-203ENST00000394925 PTP4A3O75365 173 aa17.51■□□□□ 0.39
TRAF4-203ENST00000394925 KRT34O76011 436 aa17.51■□□□□ 0.39
TRAF4-203ENST00000394925 MMP9P14780 707 aa17.51■□□□□ 0.39
TRAF4-203ENST00000394925 RPL15P61313 204 aaKnown RBP17.51■□□□□ 0.39
TRAF4-203ENST00000394925 KLF10Q13118 480 aa17.51■□□□□ 0.39
TRAF4-203ENST00000394925 GK2Q14410 553 aaPredicted RBP17.51■□□□□ 0.39
TRAF4-203ENST00000394925 TAF9Q16594 264 aa17.51■□□□□ 0.39
TRAF4-203ENST00000394925 SFRP4Q6FHJ7 346 aaPredicted RBP17.51■□□□□ 0.39
TRAF4-203ENST00000394925 COLCA1Q6ZS62 124 aa17.51■□□□□ 0.39
TRAF4-203ENST00000394925 CELF2-AS1Q8N7Q2 184 aa17.51■□□□□ 0.39
TRAF4-203ENST00000394925 BOLLQ8N9W6 283 aaKnown RBP17.51■□□□□ 0.39
TRAF4-203ENST00000394925 LINC01006Q8NI28 216 aa17.51■□□□□ 0.39
TRAF4-203ENST00000394925 TSSK2Q96PF2 358 aa17.51■□□□□ 0.39
TRAF4-203ENST00000394925 TMEM120AQ9BXJ8 343 aa17.51■□□□□ 0.39
TRAF4-203ENST00000394925 GID8Q9NWU2 228 aa17.51■□□□□ 0.39
TRAF4-203ENST00000394925 GMPR2Q9P2T1 348 aaKnown RBP17.51■□□□□ 0.39
TRAF4-203ENST00000394925 TMEM5Q9Y2B1 443 aa17.51■□□□□ 0.39
TRAF4-203ENST00000394925 LIPFP07098 398 aa17.5■□□□□ 0.39
TRAF4-203ENST00000394925 CD200P41217 278 aa17.5■□□□□ 0.39
TRAF4-203ENST00000394925 CDKN2AP42771 156 aaKnown RBP17.5■□□□□ 0.39
TRAF4-203ENST00000394925 RAD23AP54725 363 aa17.5■□□□□ 0.39
TRAF4-203ENST00000394925 IFI44LQ53G44 452 aa17.5■□□□□ 0.39
TRAF4-203ENST00000394925 METTL11BQ5VVY1 283 aa17.5■□□□□ 0.39
TRAF4-203ENST00000394925 ADCK1Q86TW2 530 aa17.5■□□□□ 0.39
TRAF4-203ENST00000394925 LHX4Q969G2 390 aa17.5■□□□□ 0.39
TRAF4-203ENST00000394925 SLCO4A1Q96BD0 722 aa17.5■□□□□ 0.39
TRAF4-203ENST00000394925 WDFY2Q96P53 400 aa17.5■□□□□ 0.39
TRAF4-203ENST00000394925 TRIM15Q9C019 465 aa17.5■□□□□ 0.39
TRAF4-203ENST00000394925 RNF7Q9UBF6 113 aa17.5■□□□□ 0.39
TRAF4-203ENST00000394925 SIGLEC7Q9Y286 467 aa17.5■□□□□ 0.39
TRAF4-203ENST00000394925 IGHV1-69DA0A0B4J2H0 117 aa17.49■□□□□ 0.39
TRAF4-203ENST00000394925 C3orf80F5H4A9 247 aa17.49■□□□□ 0.39
TRAF4-203ENST00000394925 F5H5K5 113 aa17.49■□□□□ 0.39
TRAF4-203ENST00000394925 DCTN6O00399 190 aa17.49■□□□□ 0.39
TRAF4-203ENST00000394925 ADAM20O43506 726 aa17.49■□□□□ 0.39
TRAF4-203ENST00000394925 CLPXO76031 633 aa17.49■□□□□ 0.39
TRAF4-203ENST00000394925 IGHV1-69P01742 117 aa17.49■□□□□ 0.39
TRAF4-203ENST00000394925 IGHV4-59P01825 116 aa17.49■□□□□ 0.39
TRAF4-203ENST00000394925 ACSM4P0C7M7 580 aa17.49■□□□□ 0.39
TRAF4-203ENST00000394925 PGM2L1Q6PCE3 622 aa17.49■□□□□ 0.39
TRAF4-203ENST00000394925 FKBP9P1Q75LS8 142 aa17.49■□□□□ 0.39
TRAF4-203ENST00000394925 NAA40Q86UY6 237 aa17.49■□□□□ 0.39
TRAF4-203ENST00000394925 PNLDC1Q8NA58 520 aaKnown RBP17.49■□□□□ 0.39
TRAF4-203ENST00000394925 SLC7A13Q8TCU3 470 aa17.49■□□□□ 0.39
TRAF4-203ENST00000394925 GPX7Q96SL4 187 aaPredicted RBP17.49■□□□□ 0.39
TRAF4-203ENST00000394925 RASSF4Q9H2L5 321 aa17.49■□□□□ 0.39
TRAF4-203ENST00000394925 TCF7L1Q9HCS4 588 aa17.49■□□□□ 0.39
TRAF4-203ENST00000394925 SLC22A31A6NKX4 558 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 LGALS8O00214 317 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 TSPAN15O95858 294 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 PROK1P58294 105 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 COX10Q12887 443 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 MALLQ13021 153 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 MAPRE2Q15555 327 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 OR8G1Q15617 311 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 OR8B8Q15620 311 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 KCNJ8Q15842 424 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 LINC00346Q8IVM7 164 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 SCCPDHQ8NBX0 429 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 SPRYD4Q8WW59 207 aaPredicted RBP17.48■□□□□ 0.39
TRAF4-203ENST00000394925 PITX2Q99697 317 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 FN3KRPQ9HA64 309 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 SMURF1Q9HCE7 757 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 SRA1Q9HD15 236 aaKnown RBP17.48■□□□□ 0.39
TRAF4-203ENST00000394925 CMTM6Q9NX76 183 aa17.48■□□□□ 0.39
TRAF4-203ENST00000394925 A0A0U1RQK1 487 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 LCATP04180 440 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 CA6P23280 308 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 CRABP1P29762 137 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 MDH1P40925 334 aaKnown RBP17.47■□□□□ 0.39
TRAF4-203ENST00000394925 IER3P46695 156 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 FXYD6P3P58550 94 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 ARF6P62330 175 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 DBPQ10586 325 aaPredicted RBP17.47■□□□□ 0.39
TRAF4-203ENST00000394925 SF3A3Q12874 501 aaKnown RBP eCLIP17.47■□□□□ 0.392e-6■■□□□ 11.8
TRAF4-203ENST00000394925 KRTAP27-1Q3LI81 207 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 DNM1P34Q6PK57 102 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 DPY19L2P2Q6ZN68 376 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 CFAP77Q6ZQR2 320 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 PGAP1Q75T13 922 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 PDZD9Q8IXQ8 264 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 FAM110DQ8TAY7 271 aaPredicted RBP17.47■□□□□ 0.39
TRAF4-203ENST00000394925 RSRC1Q96IZ7 334 aaKnown RBP17.47■□□□□ 0.39
TRAF4-203ENST00000394925 HSH2DQ96JZ2 352 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 SIRPDQ9H106 197 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 ANKRD19PQ9H560 264 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 SAR1AQ9NR31 198 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 MRGBPQ9NV56 204 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 B9D1Q9UPM9 204 aa17.47■□□□□ 0.39
TRAF4-203ENST00000394925 IGLV1-36A0A0B4J1U3 117 aa17.46■□□□□ 0.39
TRAF4-203ENST00000394925 CXCR6O00574 342 aa17.46■□□□□ 0.39
TRAF4-203ENST00000394925 TXNDC12O95881 172 aa17.46■□□□□ 0.39
TRAF4-203ENST00000394925 RPS6KA3P51812 740 aa17.46■□□□□ 0.39
TRAF4-203ENST00000394925 SLC18B1Q6NT16 456 aa17.46■□□□□ 0.39
TRAF4-203ENST00000394925 CBLL1Q75N03 491 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms