RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 LDAHQ9H6V9 325 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 CTSFQ9UBX1 484 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 EXPH5Q8NEV8 1989 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 A0A0A6YYH2 397 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 A0A0D9SG52 128 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 RNF222A6NCQ9 220 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 A6NJ64 397 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 FAM25EA8MYX2 175 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 DISC1C4P0D8 188 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 MYF5P13349 255 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 ZBTB25P24278 435 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 FBXW4P57775 412 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 FGL1Q08830 312 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 ZNF169Q14929 603 aaPredicted RBP11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 SMAD2Q15796 467 aaKnown RBP11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 C14orf28Q4W4Y0 310 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 TMEM244Q5VVB8 128 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 RNF144BQ7Z419 303 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 BARX1Q9HBU1 254 aaPredicted RBP11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 SUSD2Q9UGT4 822 aa11.13□□□□□ -0.63
PPP3CB-204ENST00000394829 KANTRA0A1W2PQU2 76 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 CPED1A4D0V7 1026 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 METTL21EPA6NDL7 271 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 F8W036 122 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 TTRP02766 147 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 DCNP07585 359 aaKnown RBP11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 GNB3P16520 340 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 BDKRB2P30411 391 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 PCK2Q16822 640 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 ELP2Q6IA86 826 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 SLC25A42Q86VD7 318 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 NKAIN3Q8N8D7 197 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 SLC2A4RGQ9NR83 387 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 COMMD9Q9P000 198 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 RAB22AQ9UL26 194 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 CABIN1Q9Y6J0 2220 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 RALGAPA1Q6GYQ0 2036 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 NUDT21O43809 227 aaKnown RBP11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 HRH1P35367 487 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 CD96P40200 585 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 SRSF4Q08170 494 aaKnown RBP11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 LYG2Q86SG7 212 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 BOLLQ8N9W6 283 aaKnown RBP11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 ADAD2Q8NCV1 583 aaKnown RBP11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 PTX4Q96A99 478 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 CYYR1Q96J86 154 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 NUDT22Q9BRQ3 303 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 ZNF471Q9BX82 626 aaPredicted RBP11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 FAM206AQ9NX38 181 aa11.12□□□□□ -0.63
PPP3CB-204ENST00000394829 MED12Q93074 2177 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 C9orf170A2RU37 121 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 H3BML4 177 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 ATG12O94817 140 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 VSIG8P0DPA2 414 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 SRFP11831 508 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 RAB6AP20340 208 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 STARP49675 285 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 RNF4P78317 190 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 IL13RA1P78552 427 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 HSF1Q00613 529 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 TLE3Q04726 772 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 MEF2DQ14814 521 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 H1FNTQ75WM6 255 aaPredicted RBP11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 TSTD1Q8NFU3 115 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 CASTOR1Q8WTX7 329 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 RNF133Q8WVZ7 376 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 SPACA5Q96QH8 159 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 PRRT1Q99946 306 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 RAB33BQ9H082 229 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 ZNF107Q9UII5 783 aaPredicted RBP11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 SLC5A6Q9Y289 635 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 A6NIZ1 184 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 OR2AT4A6NND4 320 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 BCL2L11O43521 198 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 SLC25A4P12235 298 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 CD27P26842 260 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 DLSTP36957 453 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 MMP16P51512 607 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 RAP1BP61224 184 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 RAP1AP62834 184 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 QRFPP83859 136 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 DNM1P34Q6PK57 102 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 MOB3CQ70IA8 216 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 NANPQ8TBE9 248 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 C2CD4CQ8TF44 421 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 C11orf40Q8WZ69 217 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 FOXRED1Q96CU9 486 aaPredicted RBP11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 SLAMF6Q96DU3 332 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 FN3KRPQ9HA64 309 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 SLC2A8Q9NY64 477 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 GLS2Q9UI32 602 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 TMEM200CA6NKL6 621 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 LMO7DNF2Z398 122 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 DNASE2O00115 360 aaPredicted RBP11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 SYT7O43581 403 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 STK17BO94768 372 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 OR2F2O95006 317 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 ERCC1P07992 297 aaPredicted RBP11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 RD3LP0DJH9 198 aa11.11□□□□□ -0.63
PPP3CB-204ENST00000394829 AKR1C4P17516 323 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms