RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 B4GALT1P15291 398 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 STOMP27105 288 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 MMP16P51512 607 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 AP3S2P59780 193 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 PLGLB1Q02325 96 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 FDX2Q6P4F2 183 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 TMEM81Q6P7N7 255 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 ANGPTL5Q86XS5 388 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 OR8B12Q8NGG6 310 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 OR5D14Q8NGL3 314 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 OR10D3Q8NH80 312 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 C20orf85Q9H1P6 137 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 NOX3Q9HBY0 568 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 ZNF69Q9UC07 566 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 NUBP2Q9Y5Y2 271 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 M0QYG6 137 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 ETV2O00321 342 aaPredicted RBP9.84□□□□□ -0.83
TCOF1-203ENST00000394269 AKR7A2O43488 359 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 XRCC3O43542 346 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 PSMB1P20618 241 aaKnown RBP9.84□□□□□ -0.83
TCOF1-203ENST00000394269 ACHEP22303 614 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 CCNOP22674 350 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 BDKRB2P30411 391 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 CLDN15P56746 228 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 UBE2MP61081 183 aaKnown RBP9.84□□□□□ -0.83
TCOF1-203ENST00000394269 MAB21L1Q13394 359 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 NKPD1Q17RQ9 610 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 LINC00303Q3SY05 128 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 AWAT2Q6E213 333 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 SLC25A47Q6Q0C1 308 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 BAIAP2L2Q6UXY1 529 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 OR2M2Q96R28 347 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 ETV7Q9Y603 341 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 ATMQ13315 3056 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 SPAARA0A1B0GVQ0 90 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 DHHO43323 396 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 HPP00738 406 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 HRGP04196 525 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 CD3DP04234 171 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 YES1P07947 543 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 TRIP6Q15654 476 aaKnown RBP9.84□□□□□ -0.83
TCOF1-203ENST00000394269 C3AR1Q16581 482 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 ST3GAL2Q16842 350 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 SCGB2B2Q4G0G5 96 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 ANKRD16Q6P6B7 361 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 AAED1Q7RTV5 226 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 DEFB124Q8NES8 71 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 PSMF1Q92530 271 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 PRRG4Q9BZD6 226 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.84□□□□□ -0.83
TCOF1-203ENST00000394269 BANF2Q9H503 90 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 CCDC187A0A096LP49 1063 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 TNFRSF10AO00220 468 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 PMS2P2O95744 297 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 RAB3AP20336 220 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 MSR1P21757 451 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 NTF4P34130 210 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 RAD52P43351 418 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 PMPCAQ10713 525 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 NHLRC1Q6VVB1 395 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 DBX2Q6ZNG2 339 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 HDDC2Q7Z4H3 204 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 CD163Q86VB7 1156 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 ELMOD2Q8IZ81 293 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 UTP23Q9BRU9 249 aaKnown RBP9.83□□□□□ -0.84
TCOF1-203ENST00000394269 MFRPQ9BY79 579 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 EXO5Q9H790 373 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 SPTBN1Q01082 2364 aaKnown RBP9.83□□□□□ -0.84
TCOF1-203ENST00000394269 HSPB2A8KAH6 182 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 E9PLN8 166 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 LIPCP11150 499 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 ZNF93P35789 620 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-203ENST00000394269 HSPB2Q16082 182 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 SLC22A6Q4U2R8 563 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 DCAF10Q5QP82 559 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 GALNTL5Q7Z4T8 443 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 TMED4Q7Z7H5 227 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 OR1M1Q8NGA1 313 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 OR4S1Q8NGB4 309 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 OR51S1Q8NGJ8 323 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 OR52B4Q8NGK2 314 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 AKR7LQ8NHP1 331 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 TMEM41AQ96HV5 264 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 MOV10Q9HCE1 1003 aaKnown RBP9.83□□□□□ -0.84
TCOF1-203ENST00000394269 ZNF292O60281 2723 aa9.83□□□□□ -0.84
TCOF1-203ENST00000394269 ARGFXA6NJG6 315 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 MPIG6BO95866 241 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 ECDO95905 644 aaPredicted RBP9.82□□□□□ -0.84
TCOF1-203ENST00000394269 ZNF883P0CG24 379 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 SRD5A2P31213 254 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 CASRP41180 1078 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 H3F3AP84243 136 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 OR1C1Q15619 314 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 Q5BKY6 102 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 DEGS2Q6QHC5 323 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 TMPRSS7Q7RTY8 843 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 GPR137CQ8N3F9 429 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 MEIOBQ8N635 442 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 OR6M1Q8NGM8 313 aa9.82□□□□□ -0.84
TCOF1-203ENST00000394269 OR2AE1Q8NHA4 323 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms