RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 SMIM11AP58511 58 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 MALLQ13021 153 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 GK2Q14410 553 aaPredicted RBP14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 SEC23BQ15437 767 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 KCNJ8Q15842 424 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 RFX4Q33E94 735 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 C11orf91Q3C1V1 193 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 WDR25Q64LD2 544 aaPredicted RBP14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 ZNF841Q6ZN19 808 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 BHLHE23Q8NDY6 225 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 OR11L1Q8NGX0 322 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 TMIGD2Q96BF3 282 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 TSSK2Q96PF2 358 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 ERMAPQ96PL5 475 aaPredicted RBP14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 ATF6BQ99941 703 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 CYB5R1Q9UHQ9 305 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 KCNG2Q9UJ96 466 aa14.58□□□□□ -0.08
SNRPA1-202ENST00000394082 SRRM5B3KS81 715 aa14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 ENSAO43768 121 aaKnown RBP14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 ZNF205O95201 554 aa14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 RENP00797 406 aa14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 SLC6A6P31641 620 aa14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 RPL15P61313 204 aaKnown RBP14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 KRT72Q14CN4 511 aa14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 MEP1BQ16820 701 aa14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 CLEC12AQ5QGZ9 265 aa14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 CD276Q5ZPR3 534 aa14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 CORO6Q6QEF8 472 aa14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 TMEM86BQ8N661 226 aa14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 OR10S1Q8NGN2 331 aa14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 PITX2Q99697 317 aa14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 PNRC2Q9NPJ4 139 aaKnown RBP14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 TRIM36Q9NQ86 728 aa14.57□□□□□ -0.08
SNRPA1-202ENST00000394082 ATP8B1O43520 1251 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 NDUFA2O43678 99 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 GPANK1O95872 356 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 HLA-DPB1P04440 258 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 GGT2P36268 569 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 CENPAP49450 140 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 SF3A3Q12874 501 aaKnown RBP eCLIP14.56□□□□□ -0.089e-7■■■■■ 38.9
SNRPA1-202ENST00000394082 GPR157Q5UAW9 335 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 GLYATQ6IB77 296 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 CFAP77Q6ZQR2 320 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 PGAP1Q75T13 922 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 JAZF1Q86VZ6 243 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 OR2AJ1Q8NGZ0 328 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 FANK1Q8TC84 345 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 NMNAT3Q96T66 252 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 CDADC1Q9BWV3 514 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 OR52D1Q9H346 318 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 GORASP2Q9H8Y8 452 aa14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 SRA1Q9HD15 236 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-202ENST00000394082 IGHV3OR16-10A0A075B7F0 116 aa14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 F5H5K5 113 aa14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 HOXA3O43365 443 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 GMDSO60547 372 aa14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 NCK1P16333 377 aa14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 HIST1H1CP16403 213 aaKnown RBP14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 MDKP21741 143 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 NUDT2P50583 147 aa14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 TPTEP56180 551 aa14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 TRAP1Q12931 704 aaKnown RBP14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 DEFB112Q30KQ8 113 aa14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 FAM201AQ5SY85 155 aa14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 Q6YL49 198 aa14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 SPATC1Q76KD6 591 aa14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 CMTM5Q96DZ9 223 aa14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 FAM71F1Q96KD3 344 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 WDR76Q9H967 626 aa14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 FN3KRPQ9HA64 309 aa14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 SPAG4Q9NPE6 437 aa14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 POMT1Q9Y6A1 747 aa14.55□□□□□ -0.08
SNRPA1-202ENST00000394082 P2RY10O00398 339 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 TNFRSF13BO14836 293 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 FAM20BO75063 409 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 GMNNO75496 209 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 NDUFA7O95182 113 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 LCATP04180 440 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 SEMG1P04279 462 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 OTX1P32242 354 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 IFNGR2P38484 337 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 PSME3P61289 254 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 FGF12P61328 243 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 PDLIM3Q53GG5 364 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 LYPD2Q6UXB3 125 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 SPERTQ8NA61 448 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 OR4F5Q8NH21 305 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 SPRYD4Q8WW59 207 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 ZDHHC16Q969W1 377 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 SLCO4A1Q96BD0 722 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 BEX1Q9HBH7 125 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 RPRD1BQ9NQG5 326 aaKnown RBP14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 KIF17Q9P2E2 1029 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 ERVK-18Q9QC07 812 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 RNF7Q9UBF6 113 aa14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 SOX21Q9Y651 276 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-202ENST00000394082 VWFP04275 2813 aa14.53□□□□□ -0.08
SNRPA1-202ENST00000394082 CD300LBA8K4G0 201 aa14.53□□□□□ -0.08
SNRPA1-202ENST00000394082 ZNF879B4DU55 563 aa14.53□□□□□ -0.08
SNRPA1-202ENST00000394082 C22orf46C9J442 243 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms