RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 RSPO1Q2MKA7 263 aaPredicted RBP13.17□□□□□ -0.3
MKS1-202ENST00000393119 ZBTB37Q5TC79 503 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 ABLIM2Q6H8Q1 611 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 FDX2Q6P4F2 183 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 ZNF782Q6ZMW2 699 aaPredicted RBP13.17□□□□□ -0.3
MKS1-202ENST00000393119 ZFP62Q8NB50 900 aaPredicted RBP13.17□□□□□ -0.3
MKS1-202ENST00000393119 UPRTQ96BW1 309 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 ABHD1Q96SE0 405 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 KCNJ15Q99712 375 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 LIN7BQ9HAP6 207 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 FREM1Q5H8C1 2179 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 IFITM5A6NNB3 132 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 KLK10O43240 276 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 TMIGD3P0DMS9 266 aaPredicted RBP13.17□□□□□ -0.3
MKS1-202ENST00000393119 CTRB1P17538 263 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 RRADP55042 308 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 RRAS2P62070 204 aaPredicted RBP13.17□□□□□ -0.3
MKS1-202ENST00000393119 CTRB2Q6GPI1 263 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 PRSS45Q7RTY3 260 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 OR51E1Q8TCB6 317 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 GPR137Q96N19 417 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 PBOV1Q9GZY1 135 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 LDAHQ9H6V9 325 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 EXO5Q9H790 373 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 F5H5K5 113 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 SLC43A1O75387 559 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 ACSM4P0C7M7 580 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 ZNF121P58317 390 aaPredicted RBP13.16□□□□□ -0.3
MKS1-202ENST00000393119 SNRPD2P62316 118 aaKnown RBP13.16□□□□□ -0.3
MKS1-202ENST00000393119 TAGLNQ01995 201 aaKnown RBP13.16□□□□□ -0.3
MKS1-202ENST00000393119 SLC10A1Q14973 349 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 TSPO2Q5TGU0 170 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 MZT2AQ6P582 158 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 PLET1Q6UQ28 207 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 ZNF671Q8TAW3 534 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 ENKURQ8TC29 256 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 SCMH1Q96GD3 660 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 ZCCHC4Q9H5U6 513 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 LUZP4Q9P127 313 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 KCNMB2Q9Y691 235 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 V9GY05 133 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 KIAA1549Q9HCM3 1950 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 APC2O95996 2303 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 TNRC6AQ8NDV7 1962 aaKnown RBP13.16□□□□□ -0.3
MKS1-202ENST00000393119 CYTIPO60759 359 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 TGM6O95932 706 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 PDGFAP04085 211 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 MSR1P21757 451 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 CCR9P51686 369 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 SPOCK1Q08629 439 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 RTP5Q14D33 572 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 TAF13Q15543 124 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 C10orf128Q5T292 105 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 Q8N402 240 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 OR13C3Q8NGS6 347 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 CPNE4Q96A23 557 aaPredicted RBP13.16□□□□□ -0.3
MKS1-202ENST00000393119 GAL3ST1Q99999 423 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 SF3B5Q9BWJ5 86 aaKnown RBP13.16□□□□□ -0.3
MKS1-202ENST00000393119 CGGBP1Q9UFW8 167 aaPredicted RBP13.16□□□□□ -0.3
MKS1-202ENST00000393119 DHDHQ9UQ10 334 aa13.16□□□□□ -0.3
MKS1-202ENST00000393119 ANKRD11Q6UB99 2663 aaPredicted RBP13.15□□□□□ -0.3
MKS1-202ENST00000393119 HSD11B1P28845 292 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 CEACAM16Q2WEN9 425 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 SFRP5Q5T4F7 317 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 BCL2L15Q5TBC7 163 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 FAM57BQ71RH2 274 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 CMTM4Q8IZR5 234 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 FGGYQ96C11 551 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 NELFAQ9H3P2 528 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 CYSLTR2Q9NS75 346 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 ING3Q9NXR8 418 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 OR5V1Q9UGF6 321 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 ZZEF1O43149 2961 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 EFNB2P52799 333 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 NHLH1Q02575 133 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 BIVMQ86UB2 503 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 OR8B12Q8NGG6 310 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 AKR7LQ8NHP1 331 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 SLC25A38Q96DW6 304 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 ADAT3Q96EY9 351 aaPredicted RBP13.15□□□□□ -0.3
MKS1-202ENST00000393119 HYLS1Q96M11 299 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 ZFP3Q96NJ6 502 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 FAM117AQ9C073 453 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 MCUBQ9NWR8 336 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 HSPB11Q9Y547 144 aa13.15□□□□□ -0.3
MKS1-202ENST00000393119 A0A096LPE4 126 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 A0A1W2PPZ6 126 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 ZNF878C9JN71 531 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 PROB1E7EW31 1015 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 SLC22A5O76082 557 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 ITGA5P08648 1049 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 ARSBP15848 533 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 ABOP16442 354 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 PTBP1P26599 531 aaKnown RBP eCLIP13.14□□□□□ -0.31
MKS1-202ENST00000393119 CX3CR1P49238 355 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 PER3P56645 1201 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 HGFACQ04756 655 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 MAB21L1Q13394 359 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 KLHL24Q6TFL4 600 aa13.14□□□□□ -0.31
MKS1-202ENST00000393119 NUFIP2Q7Z417 695 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms