RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 BOLA2-SMG1P6H3BVE0 249 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 SLC17A2O00624 439 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 SYNGR3O43761 229 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 LMX1BO60663 402 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 IGLV3-1P01715 115 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 FCGR2AP12318 317 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 FOSL1P15407 271 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 CRYGSP22914 178 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 PITPNAQ00169 270 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 TRIQKQ629K1 86 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 FAM166AQ6J272 317 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 FAM57BQ71RH2 274 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 GDPD3Q7L5L3 318 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 ZNF627Q7L945 461 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 ABHD12BQ7Z5M8 362 aaPredicted RBP10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 CMTM4Q8IZR5 234 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 OR1J2Q8NGS2 313 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 RAB40AQ8WXH6 277 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 APH1AQ96BI3 265 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 FGGYQ96C11 551 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 GPR84Q9NQS5 396 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 SLC17A5Q9NRA2 495 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 CLEC4AQ9UMR7 237 aa10.04□□□□□ -0.8
SMARCAL1-203ENST00000392128 A0A0U1RQV5 110 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 A6NIN4 97 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 SLC22A20A6NK97 555 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 ZNF587BE7ETH6 402 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 F5H5K5 113 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 M0R135 149 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 AQP7O14520 342 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 PEX14O75381 377 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 FARS2O95363 451 aaKnown RBP10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 ITGA5P08648 1049 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 ZNF32P17041 273 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 SDHBP21912 280 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 DDOSTP39656 456 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 ZNF169Q14929 603 aaPredicted RBP10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 KRTAP27-1Q3LI81 207 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 ZNF529Q6P280 563 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 ZNF813Q6ZN06 617 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 DOK3Q7L591 496 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 SLC16A14Q7RTX9 510 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 PLPP7Q8NBV4 271 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 ZNF799Q96GE5 643 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 PGAM5Q96HS1 289 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 ABHD1Q96SE0 405 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 ZMAT5Q9UDW3 170 aaKnown RBP10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 TIMM10BQ9Y5J6 103 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 LOC390937A0A1W2PQ73 354 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 OR6C6A6NF89 314 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 TGM6O95932 706 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 IGHV3-9P01782 118 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 ANOS1P23352 680 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 TAB1Q15750 504 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 RAB11BQ15907 218 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 ADGRE4PQ86SQ3 457 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 SKA3Q8IX90 412 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 C19orf18Q8NEA5 215 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 OR51A2Q8NGJ7 313 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 OR5D14Q8NGL3 314 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 OR1F12Q8NHA8 337 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 ADAT3Q96EY9 351 aaPredicted RBP10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 SCNM1Q9BWG6 230 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 PLSCR2Q9NRY7 297 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 WASF3Q9UPY6 502 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 FREM1Q5H8C1 2179 aa10.03□□□□□ -0.8
SMARCAL1-203ENST00000392128 FUOMA2VDF0 154 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 CTDSPLO15194 276 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 PFDN1O60925 122 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 ADRB1P08588 477 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 SPNP16150 400 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 SPINK2P20155 84 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 AGTR1P30556 359 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 SLC6A9P48067 706 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 MMP15P51511 669 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 ART1P52961 327 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 PSG4Q00888 419 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 ZNF774Q6NX45 483 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 DRAM2Q6UX65 266 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 CCBE1Q6UXH8 406 aaPredicted RBP10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 Q6ZSR3 168 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 NAA40Q86UY6 237 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 COMMD2Q86X83 199 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 LYPD6Q86Y78 171 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 DTX3Q8N9I9 347 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 SYNPRQ8TBG9 265 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 FOXRED1Q96CU9 486 aaPredicted RBP10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 HAVCR1Q96D42 359 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 S100A16Q96FQ6 103 aaKnown RBP10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 OR2H1Q9GZK4 316 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 UPB1Q9UBR1 384 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 AKAP13Q12802 2813 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 E9PLN8 166 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 PLA2G10O15496 165 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 DBHP09172 617 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 MMP7P09237 267 aaPredicted RBP10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 ZNF20P17024 532 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 BDKRB2P30411 391 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 RFX2P48378 723 aa10.02□□□□□ -0.81
SMARCAL1-203ENST00000392128 BCAP31P51572 246 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms