RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 ALX4Q9H161 411 aaPredicted RBP8.63□□□□□ -1.03
COL6A3-204ENST00000392003 OR51B6Q9H340 312 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 METTL17Q9H7H0 456 aaPredicted RBP8.63□□□□□ -1.03
COL6A3-204ENST00000392003 ZFP64Q9NPA5 681 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 DLL4Q9NR61 685 aa8.63□□□□□ -1.03
COL6A3-204ENST00000392003 A6NJY4 79 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 H3BML4 177 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 H7C417 338 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 ZFAND5O76080 213 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 GIMD1P0DJR0 217 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 TMIGD3P0DMS9 266 aaPredicted RBP8.62□□□□□ -1.03
COL6A3-204ENST00000392003 GTF2F2P13984 249 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 SDHBP21912 280 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 MSX1P28360 303 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 ZP4Q12836 540 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 LINC00303Q3SY05 128 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 TEX30Q5JUR7 227 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 TMEM244Q5VVB8 128 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 SEMA4CQ9C0C4 833 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 SLC17A5Q9NRA2 495 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 MTFP1Q9UDX5 166 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 EMC9Q9Y3B6 208 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 R4GMQ9 66 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 A0A1W2PPL8 197 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 PTGFRP43088 359 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 RPS15P62841 145 aaKnown RBP8.62□□□□□ -1.03
COL6A3-204ENST00000392003 HSF1Q00613 529 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 DEFA5Q01523 94 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 PLA2G7Q13093 441 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 FAM69BQ5VUD6 431 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 TMEM225Q6GV28 225 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 FAAP20Q6NZ36 180 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 DCXRQ7Z4W1 244 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 CATSPERDQ86XM0 798 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 LRRC18Q8N456 261 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 JAGN1Q8N5M9 183 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 OR11H4Q8NGC9 324 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 ASB10Q8WXI3 467 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 MR1Q95460 341 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 C8orf44Q96CB5 159 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 CLUHP3Q96NS8 147 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 OR52A1Q9UKL2 312 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 POLR1DQ9Y2S0 133 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 NUP210LQ5VU65 1888 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 EML5Q05BV3 1969 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 DNAH14Q0VDD8 3507 aa8.62□□□□□ -1.03
COL6A3-204ENST00000392003 TMEM269A0A1B0GVZ9 245 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 A0A1W2PQM1 296 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 ZNF208O43345 1280 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 SOX15O60248 233 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 CTAG2O75638 210 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 NDUFB6O95139 128 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 RAB3DO95716 219 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 PNPP00491 289 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 IL5P05113 134 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 AKAIN1P0CW23 69 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 HLA-DOBP13765 273 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 ACHEP22303 614 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 HTR2CP28335 458 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 S100A7P31151 101 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 RAD52P43351 418 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 RGS19P49795 217 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 MFGE8Q08431 387 aaPredicted RBP8.61□□□□□ -1.03
COL6A3-204ENST00000392003 FOXF1Q12946 379 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 SNTB1Q13884 538 aaKnown RBP8.61□□□□□ -1.03
COL6A3-204ENST00000392003 TSC22D1Q15714 1073 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 TMEM255AQ5JRV8 349 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 GLDNQ6ZMI3 551 aaPredicted RBP8.61□□□□□ -1.03
COL6A3-204ENST00000392003 ZNF627Q7L945 461 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 CPEB2Q7Z5Q1 589 aaKnown RBP8.61□□□□□ -1.03
COL6A3-204ENST00000392003 PLPP7Q8NBV4 271 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 APCDD1LQ8NCL9 501 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 PPP1R14AQ96A00 147 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 NECAB3Q96P71 396 aaPredicted RBP8.61□□□□□ -1.03
COL6A3-204ENST00000392003 TAS2R4Q9NYW5 299 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 SESN1Q9Y6P5 492 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 IGLV3-12A0A075B6K2 115 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 IGHV5-10-1A0A0J9YXX1 117 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 FTCDNL1E5RQL4 147 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 EIF1AYO14602 144 aaKnown RBP8.61□□□□□ -1.03
COL6A3-204ENST00000392003 TOXO94900 526 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 MPZL1O95297 269 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 WISP1O95388 367 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 IFNA7P01567 189 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 ALDOBP05062 364 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 ACTBP60709 375 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 TSPAN5P62079 268 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 ACTG1P63261 375 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 KRBOX4Q5JUW0 171 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 ZNF574Q6ZN55 896 aaPredicted RBP8.61□□□□□ -1.03
COL6A3-204ENST00000392003 GINS4Q9BRT9 223 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 DEFB126Q9BYW3 111 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 POTEKPQ9BYX7 375 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 MYEF2Q9P2K5 600 aaKnown RBP8.61□□□□□ -1.03
COL6A3-204ENST00000392003 FBXL3Q9UKT7 428 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 B3GALT5Q9Y2C3 310 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 TMEM82A0PJX8 343 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 DCDC2BA2VCK2 349 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 SNRPGP15A8MWD9 76 aa8.61□□□□□ -1.03
COL6A3-204ENST00000392003 MS4A18H0YCH9 400 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms