RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 ARL4DP49703 201 aa13.02□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZNF117Q03924 483 aa13.02□□□□□ -0.33
LRRFIP1-204ENST00000392000 SGCAQ16586 387 aa13.02□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZNF684Q5T5D7 378 aa13.02□□□□□ -0.33
LRRFIP1-204ENST00000392000 ATG4DQ86TL0 474 aaPredicted RBP13.02□□□□□ -0.33
LRRFIP1-204ENST00000392000 OR5AP2Q8NGF4 316 aa13.02□□□□□ -0.33
LRRFIP1-204ENST00000392000 MRI1Q9BV20 369 aa13.02□□□□□ -0.33
LRRFIP1-204ENST00000392000 OR5AC2Q9NZP5 309 aa13.02□□□□□ -0.33
LRRFIP1-204ENST00000392000 OR52A1Q9UKL2 312 aa13.02□□□□□ -0.33
LRRFIP1-204ENST00000392000 DOCK7Q96N67 2140 aa13.02□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZNF878C9JN71 531 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 PNMTP11086 282 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 CD1CP29017 333 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 GPR3P46089 330 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 EEF1A1P5Q5VTE0 462 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 ELSPBP1Q96BH3 223 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 CMTM3Q96MX0 182 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 A0A0A6YYH2 397 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 PRSS37A4D1T9 235 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 A6NJ64 397 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 TNFSF12O43508 249 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 CRTAPO75718 401 aaPredicted RBP13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZNF14P17017 642 aaPredicted RBP13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 CLINT1Q14677 625 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 DEFB133Q30KQ1 61 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 PABPC1L2AQ5JQF8 200 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 AVPI1Q5T686 147 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 RPL7L1Q6DKI1 246 aaKnown RBP13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 LINC00114Q6XXX2 140 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 ABHD12BQ7Z5M8 362 aaPredicted RBP13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 SLC26A10Q8NG04 563 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 MCHR2Q969V1 340 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 PRRT1Q99946 306 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 SHANK1Q9Y566 2161 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 PRH1P02810 166 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 GLO1Q04760 184 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 PLCXD2Q0VAA5 305 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 NSDHLQ15738 373 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZNF595Q8IYB9 648 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 LMX1AQ8TE12 382 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 EIF5A2Q9GZV4 153 aaKnown RBP13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 NKX2-4Q9H2Z4 354 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 RHOFQ9HBH0 211 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 KCNK7Q9Y2U2 307 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 RHBDD3Q9Y3P4 386 aa13.01□□□□□ -0.33
LRRFIP1-204ENST00000392000 LINC00587B1AMM8 73 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 NPIPA5E9PKD4 350 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 NME2P1O60361 137 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZNF354AO60765 605 aaPredicted RBP13□□□□□ -0.33
LRRFIP1-204ENST00000392000 AHSA1O95433 338 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 GLRA1P23415 457 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 CDAP32320 146 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 PTGFRP43088 359 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 CBX5P45973 191 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 RAB32Q13637 225 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 KLHL24Q6TFL4 600 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 MAMDC2Q7Z304 686 aaPredicted RBP13□□□□□ -0.33
LRRFIP1-204ENST00000392000 OR51E1Q8TCB6 317 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 TOMM40LQ969M1 308 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZNF775Q96BV0 537 aaPredicted RBP13□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZC3H10Q96K80 434 aaKnown RBP13□□□□□ -0.33
LRRFIP1-204ENST00000392000 ARL5BQ96KC2 179 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 SPSB2Q99619 263 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 IFT22Q9H7X7 185 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 NPIPA1Q9UND3 350 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 RP1L1Q8IWN7 2480 aaPredicted RBP13□□□□□ -0.33
LRRFIP1-204ENST00000392000 TRBV5-7A0A0A0MS05 114 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 ARPC4-TTLL3A0A0A6YYG9 625 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 IGHV5-51A0A0C4DH38 117 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 MTRF1O75570 445 aaKnown RBP13□□□□□ -0.33
LRRFIP1-204ENST00000392000 GIMD1P0DJR0 217 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 MUC1P15941 1255 aaPredicted RBP13□□□□□ -0.33
LRRFIP1-204ENST00000392000 MEOX2P50222 304 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 PNLIPRP2P54317 469 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZSCAN4Q8NAM6 433 aaPredicted RBP13□□□□□ -0.33
LRRFIP1-204ENST00000392000 TMEM104Q8NE00 496 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 SFT2D1Q8WV19 159 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 SECTM1Q8WVN6 248 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 SULT4A1Q9BR01 284 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 PRSS44E7EML9 344 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 SOCS1O15524 211 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 ARG1P05089 322 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZNF20P17024 532 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 AMY2BP19961 511 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 ZNF141Q15928 474 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 PRTGQ2VWP7 1150 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 RNF141Q8WVD5 230 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 LMF2Q9BU23 707 aaKnown RBP13□□□□□ -0.33
LRRFIP1-204ENST00000392000 UQCC1Q9NVA1 299 aa13□□□□□ -0.33
LRRFIP1-204ENST00000392000 GDF2Q9UK05 429 aaPredicted RBP13□□□□□ -0.33
LRRFIP1-204ENST00000392000 SNAPINO95295 136 aa12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 GABRG2P18507 467 aa12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 SLC6A9P48067 706 aa12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 DHPSP49366 369 aaPredicted RBP12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 TMEM229BQ8NBD8 167 aa12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 SCARF2Q96GP6 870 aaPredicted RBP12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 CLCC1Q96S66 551 aa12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 CTSFQ9UBX1 484 aa12.99□□□□□ -0.33
LRRFIP1-204ENST00000392000 AMDHD2Q9Y303 409 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms