RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 KRBOX1C9JBD0 128 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 K7EM74 188 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 TNFRSF11BO00300 401 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 SCAMP2O15127 329 aaKnown RBP0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 EIF3HO15372 352 aaKnown RBP eCLIP0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 CHMP2AO43633 222 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 CDH16O75309 829 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 GLSO94925 669 aaPredicted RBP0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 CDRT1O95170 752 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 PAHP00439 452 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 HPRT1P00492 218 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 DUX4L2P0CJ85 424 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 DUX4L3P0CJ86 424 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 DUX4L5P0CJ88 424 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 DUX4L6P0CJ89 424 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 DUX4L7P0CJ90 424 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 RNASE2P10153 161 aaKnown RBP0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 ME2P23368 584 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 OR1E1P30953 314 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 TALDO1P37837 337 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 TNFSF9P41273 254 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 SYKP43405 635 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 GFERP55789 205 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 RPL23P62829 140 aaKnown RBP0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 CDK5Q00535 292 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 MERTKQ12866 999 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 SLC39A6Q13433 755 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 ZNF266Q14584 549 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 NCF4Q15080 339 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 RCN1Q15293 331 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 ALKBH6Q3KRA9 238 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 RNASE13Q5GAN3 156 aaKnown RBP0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 BZW1Q7L1Q6 419 aaKnown RBP0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 SSX9Q7RTT3 188 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 NKAIN4Q8IVV8 208 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 FAM71AQ8IYT1 594 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 GABRG1Q8N1C3 465 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 BBS5Q8N3I7 341 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 MIR7-3HGQ8N6C7 128 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 TTC29Q8NA56 475 aaPredicted RBP0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 ST20-AS1Q8NBB2 130 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 UBAC2Q8NBM4 344 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 APCDD1LQ8NCL9 501 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 OR9G4Q8NGQ1 327 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 OR5K2Q8NHB8 316 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 TSEN15Q8WW01 171 aaKnown RBP0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 HAUS1Q96CS2 278 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 NRBF2Q96F24 287 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 BTN2A3PQ96KV6 586 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 RNF145Q96MT1 663 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 ZNF317Q96PQ6 595 aaPredicted RBP0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 XPO6Q96QU8 1125 aaKnown RBP0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 SAMD10Q9BYL1 202 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 ACTR3CQ9C0K3 210 aaPredicted RBP0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 TMEM38AQ9H6F2 299 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 ZNF160Q9HCG1 818 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 RETNQ9HD89 108 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 RAB20Q9NX57 234 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 LYARQ9NX58 379 aaKnown RBP0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 PDP1Q9P0J1 537 aaPredicted RBP0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 DUX4Q9UBX2 424 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 RRP15Q9Y3B9 282 aaKnown RBP0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 CBY1Q9Y3M2 126 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 SCN4AP35499 1836 aa0.87□□□□□ -2.27
RNU6-440P-201ENST00000390882 SIGLEC1Q9BZZ2 1709 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 FCGBPQ9Y6R7 5405 aaPredicted RBP0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 A0A075B6Q4 140 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 KCNE1BA0A087WTH5 132 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 SMIM26A0A096LP01 95 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 IGHV3-72A0A0B4J1Y9 119 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 IGHV3OR16-9A0A0B4J2B5 98 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 IGHV1-69DA0A0B4J2H0 117 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 KBTBD11-OT1A0A1B0GTJ5 212 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 TSPAN11A1L157 253 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 CTAGE15A4D2H0 777 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 OR5H1A6NKK0 313 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 OR2AG2A6NM03 316 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 NCBP2LA6PVI3 153 aaKnown RBP0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 GABRR3A8MPY1 467 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 PDZK1P1A8MUH7 402 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 NDUFC2-KCTD14E9PQ53 114 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 H7C1H1 209 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 LGALS9O00182 355 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 PLPP1O14494 284 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 SLC9A3R1O14745 358 aaPredicted RBP0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 TAAR5O14804 337 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 NVLO15381 856 aaKnown RBP0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 CACNG3O60359 315 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 PLIN3O60664 434 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 CYB5R3P00387 301 aaPredicted RBP0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 IGLV3-25P01717 112 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 IGHV3-11P01762 117 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 HBE1P02100 147 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 CLTAP09496 248 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 CD37P11049 281 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 CTRB1P17538 263 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 CSNK2A2P19784 350 aaPredicted RBP0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 USF1P22415 310 aaPredicted RBP0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 MYL9P24844 172 aa0.86□□□□□ -2.27
RNU6-440P-201ENST00000390882 PSMB5P28074 263 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms