RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 HMGB1P1B2RPK0 211 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ZNF879B4DU55 563 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SEC14L6B5MCN3 397 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRDCB7Z8K6 153 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GPR89AB7ZAQ6 455 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 C21orf140B9A014 251 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 C9JQL5 133 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GOLGA8KD6RF30 607 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 E5RGE8 158 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ANKRD65E5RJM6 399 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 C5orf67F2Z3F1 127 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 F5H5P2 479 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 F5H768 121 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 F8VP50 259 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 INMT-MINDY4F8WBC2 141 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GOLGA8NF8WBI6 632 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 F8WDY8 70 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 G3V3Q6 166 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PRAMEF26H0Y7S4 382 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 RNASEK-C17orf49H0YIS7 233 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GOLGA6L19H0YKK7 550 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 H3BQ06 376 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 H3BTX0 84 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 BOLA2-SMG1P6H3BVE0 249 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 H7BYZ3 331 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 H7C1H1 209 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CCER2I3L3R5 266 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 I3L521 148 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GOLGA8RI6L899 631 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 J3QT63 122 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 K7EN84 100 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 K7EPI3 171 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 K7EQZ3 153 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 K7ERI5 159 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 K7ERJ3 54 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 L7N2F9 121 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ZNF701M0R085 212 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 M0R1X1 148 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 M0R2T5 61 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 M0R3G1 203 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 KIF2AO00139 706 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 DDX39AO00148 427 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SULT2B1O00204 365 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 LGALS8O00214 317 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SIRPB1O00241 398 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GPR31O00270 319 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 HIP1O00291 1037 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TNFRSF11BO00300 401 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CDC7O00311 574 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SLC1A7O00341 560 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ZNF593O00488 134 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CLDN5O00501 218 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CCL21O00585 134 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 MFNGO00587 321 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NME4O00746 187 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CLDN4O14493 209 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PLPP3O14495 311 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 BHLHE40O14503 412 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 RFXANKO14593 260 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CTDSP2O14595 271 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 XKRYO14609 159 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CCSO14618 274 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CXCL11O14625 94 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GPR171O14626 319 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ABCD4O14678 606 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CDIPTO14735 213 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PRMT5O14744 637 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SLC9A3R1O14745 358 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NDC80O14777 642 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TAAR5O14804 337 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PSMA7O14818 248 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 BCKDKO14874 412 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GEMIN2O14893 280 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 HAT1O14929 419 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NCR3O14931 201 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CASKO14936 926 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 XPO1O14980 1071 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CHUKO15111 745 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 AGPAT2O15120 278 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ANGPT2O15123 496 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SCAMP2O15127 329 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ARPC3O15145 178 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PSPHP1O15172 72 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PGRMC2O15173 223 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CTDSPLO15194 276 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 KMOO15229 486 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SLC22A1O15245 554 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ACOX3O15254 700 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 POLR3GO15318 223 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 EIF3HO15372 352 aaKnown RBP eCLIP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IPO8O15397 1037 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SLC31A1O15431 190 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CCL25O15444 150 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CCL16O15467 120 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 MAGEB4O15481 346 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CLDN3O15551 220 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TTI1O43156 1089 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ZNF208O43345 1280 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 AKR7A2O43488 359 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 EPB41L2O43491 1005 aaKnown RBP-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms