RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 RPS14P62263 151 aaKnown RBP1.47□□□□□ -2.17
TRAV40-201ENST00000390467 ARF6P62330 175 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 RPL10AP62906 217 aaKnown RBP1.47□□□□□ -2.17
TRAV40-201ENST00000390467 REEP5Q00765 189 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 EWSR1Q01844 656 aaKnown RBP eCLIP1.47□□□□□ -2.17
TRAV40-201ENST00000390467 NAB1Q13506 487 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 GK3PQ14409 553 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 NDUFA5Q16718 116 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 GPR107Q5VW38 600 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 OR2A2Q6IF42 318 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 ADNP2Q6IQ32 1131 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 ZNF880Q6PDB4 577 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 KCNIP4Q6PIL6 250 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 H2BFWTQ7Z2G1 175 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 MRPL21Q7Z2W9 205 aaKnown RBP1.47□□□□□ -2.17
TRAV40-201ENST00000390467 TGIF2LXQ8IUE1 241 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 FBXO36Q8NEA4 188 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 OR7G2Q8NG99 324 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 OR8K1Q8NGG5 319 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 OR10Z1Q8NGY1 313 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 OR52P1PQ8NH57 321 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 NUBPLQ8TB37 319 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 ACTL9Q8TC94 416 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 GIPC3Q8TF64 312 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 DNAJB3Q8WWF6 145 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 NAT6Q93015 286 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 PINX1Q96BK5 328 aaKnown RBP1.47□□□□□ -2.17
TRAV40-201ENST00000390467 CCDC124Q96CT7 223 aaKnown RBP1.47□□□□□ -2.17
TRAV40-201ENST00000390467 SMIM10Q96HG1 83 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 TGM7Q96PF1 710 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 SLC6A7Q99884 636 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 SRRQ9GZT4 340 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 C6orf62Q9GZU0 229 aaPredicted RBP1.47□□□□□ -2.17
TRAV40-201ENST00000390467 DEFB127Q9H1M4 99 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 SPNS1Q9H2V7 528 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 WDR55Q9H6Y2 383 aaPredicted RBP1.47□□□□□ -2.17
TRAV40-201ENST00000390467 WDR54Q9H977 334 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 DYRK4Q9NR20 520 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 SAMSN1Q9NSI8 373 aaKnown RBP1.47□□□□□ -2.17
TRAV40-201ENST00000390467 C19orf12Q9NSK7 152 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 LYARQ9NX58 379 aaKnown RBP1.47□□□□□ -2.17
TRAV40-201ENST00000390467 STMN3Q9NZ72 180 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 MRM2Q9UI43 246 aaKnown RBP1.47□□□□□ -2.17
TRAV40-201ENST00000390467 ERGIC3Q9Y282 383 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 TBL2Q9Y4P3 447 aaKnown RBP1.47□□□□□ -2.17
TRAV40-201ENST00000390467 HEBP2Q9Y5Z4 205 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 MRPS18BQ9Y676 258 aaKnown RBP1.47□□□□□ -2.17
TRAV40-201ENST00000390467 URGCP-MRPS24S4R325 110 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 PLA2R1Q13018 1463 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 ATP10DQ9P241 1426 aa1.47□□□□□ -2.17
TRAV40-201ENST00000390467 SMCO3A2RU48 225 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 PRSS37A4D1T9 235 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 TMEM238C9JI98 176 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 F8VP50 259 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 H3BN98 237 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 RFXANKO14593 260 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 AGPAT2O15120 278 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 NDUFA2O43678 99 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 CHST1O43916 411 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 STX10O60499 249 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 PSIP1O75475 530 aaKnown RBP1.46□□□□□ -2.18
TRAV40-201ENST00000390467 ADAP1O75689 374 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 SCGNO76038 276 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 ETHE1O95571 254 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 IGKV1D-16P01601 117 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 RPN2P04844 631 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 KRT16P08779 473 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 GNAO1P09471 354 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 UBCP0CG48 685 aaKnown RBP1.46□□□□□ -2.18
TRAV40-201ENST00000390467 PPIAL4GP0DN37 164 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 TNNI1P19237 187 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 HLA-DMAP28067 261 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 PSMB5P28074 263 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 OR1E1P30953 314 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 BTCP35070 178 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 MAS1LP35410 378 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 UGT2B10P36537 528 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 AQP2P41181 271 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 SLC1A2P43004 574 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 CRYBB2P43320 205 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 MAGEA2P43356 314 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 KIR2DS4P43632 304 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 RPL14P50914 215 aaKnown RBP1.46□□□□□ -2.18
TRAV40-201ENST00000390467 ACLYP53396 1101 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 PSMD4P55036 377 aaKnown RBP1.46□□□□□ -2.18
TRAV40-201ENST00000390467 SPCS3P61009 180 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 RAB4BP61018 213 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 MAGOHP61326 146 aaKnown RBP1.46□□□□□ -2.18
TRAV40-201ENST00000390467 ATP6V0D1P61421 351 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 ERVS71-1P61550 626 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 VSNL1P62760 191 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 LCN2P80188 198 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 KIAA0087Q14695 138 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 GANABQ14697 944 aaKnown RBP1.46□□□□□ -2.18
TRAV40-201ENST00000390467 TRAM2Q15035 370 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 ZBTB6Q15916 424 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 SLC15A2Q16348 729 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 MRPL23Q16540 153 aaKnown RBP1.46□□□□□ -2.18
TRAV40-201ENST00000390467 IMPG1Q17R60 797 aa1.46□□□□□ -2.18
TRAV40-201ENST00000390467 NDUFAF6Q330K2 333 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms