RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 FAM71E2Q8N5Q1 922 aa11.73□□□□□ -0.53
PTPRN2-203ENST00000389418 RIMS4Q9H426 269 aaPredicted RBP11.73□□□□□ -0.53
PTPRN2-203ENST00000389418 KCNJ16Q9NPI9 418 aa11.73□□□□□ -0.53
PTPRN2-203ENST00000389418 COL11A1P12107 1806 aaPredicted RBP11.73□□□□□ -0.53
PTPRN2-203ENST00000389418 ALG1L2C9J202 215 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 SOX18P35713 384 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 RNPS1Q15287 305 aaKnown RBP11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 DVL3Q92997 716 aaPredicted RBP11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 FCRL1Q96LA6 429 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 CNTNAP3BQ96NU0 1288 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 GPR87Q9BY21 358 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 IL20Q9NYY1 176 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 ZNF391Q9UJN7 358 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 SIPA1L1O43166 1804 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 KITLGP21583 273 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 GALNSP34059 522 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 CDK5R1Q15078 307 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 OR1C1Q15619 314 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 ZIC1Q15915 447 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 BEX5Q5H9J7 111 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 TINAGL1Q9GZM7 467 aaPredicted RBP11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 GREB1LQ9C091 1923 aaPredicted RBP11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 PLXNB2O15031 1838 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 TRGV5A0A0B4J1U4 118 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 SULT1C2O00338 296 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 ARPC3O15145 178 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 B4GALT1P15291 398 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 DDOSTP39656 456 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 MDGA2Q7Z553 956 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 OR13C5Q8NGS8 318 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 OR51E1Q8TCB6 317 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 SEH1LQ96EE3 360 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 SEC22AQ96IW7 307 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 BANF2Q9H503 90 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 B9D1Q9UPM9 204 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 EXO1Q9UQ84 846 aaKnown RBP11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 DOCK6Q96HP0 2047 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 A0A0B4J2E0 115 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 A0A1B0GTQ1 180 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 A0A1B0GX12 115 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 FITM1A5D6W6 292 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 C17orf112F2Z3M2 114 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 TBPP20226 339 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 FABP6P51161 128 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 FABP5Q01469 135 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 AQP6Q13520 282 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 PEA15Q15121 130 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 ZNF74Q16587 644 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 GPR32P1Q8NGA4 272 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 OR4A16Q8NH70 328 aa11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 H1FXQ92522 213 aaKnown RBP11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 ZNF436Q9C0F3 470 aaPredicted RBP11.72□□□□□ -0.53
PTPRN2-203ENST00000389418 AIPO00170 330 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 SH2D1BO14796 132 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 SLC25A1P53007 311 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 RAB11AP62491 216 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 PCK2Q16822 640 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 SPATA46Q5T0L3 261 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 OR5T1Q8NG75 326 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 NUBPLQ8TB37 319 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 GPATCH2Q9NW75 528 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 BOLA1Q9Y3E2 137 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 M0QYG6 137 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 ARL3P36405 182 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 BTG1P62324 171 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 FCN2Q15485 313 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 COMMD7Q86VX2 200 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 SIGLEC11Q96RL6 698 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 MED18Q9BUE0 208 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 EXOSC3Q9NQT5 275 aaKnown RBP11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 ASF1BQ9NVP2 202 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 FBXL4Q9UKA2 621 aa11.71□□□□□ -0.53
PTPRN2-203ENST00000389418 FOCADQ5VW36 1801 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 AGPAT2O15120 278 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 LILRB5O75023 590 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 NRASP01111 189 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 CT62P0C5K7 136 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 ELK1P19419 428 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 CDAP32320 146 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 CD79BP40259 229 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 RFX2P48378 723 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 RAB5BP61020 215 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 SORDQ00796 357 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 C3orf49Q96BT1 292 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 GDF15Q99988 308 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 SMIM3Q9BZL3 60 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 HAO2Q9NYQ3 351 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 RAB27BO00194 218 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 ZNF14P17017 642 aaPredicted RBP11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 PRICKLE4Q2TBC4 344 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 EIF2S3LQ2VIR3 472 aaKnown RBP11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 ALKBH6Q3KRA9 238 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 ACER2Q5QJU3 275 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 ELFN2Q5R3F8 820 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 CBLN3Q6UW01 205 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 PRSS42Q7Z5A4 293 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 ANKRD37Q7Z713 158 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 OR51F2Q8NH61 342 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 HRASLSQ9HDD0 168 aa11.71□□□□□ -0.54
PTPRN2-203ENST00000389418 ZFP64Q9NPA5 681 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms