RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 PRDX1Q06830 199 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 ALG10BQ5I7T1 473 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 OR51F2Q8NH61 342 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 ST7LQ8TDW4 575 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 TSEN15Q8WW01 171 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 GPR61Q9BZJ8 451 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 LMAN2LQ9H0V9 348 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 SMOC1Q9H4F8 434 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 FBXL21Q9UKT6 434 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 MYO15AQ9UKN7 3530 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 CST4P01036 141 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 F13BP05160 661 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 C5AR1P21730 350 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 BIKQ13323 160 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 KHDC3LQ587J8 217 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 EXOSC6Q5RKV6 272 aaKnown RBP13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 LEG1Q6P5S2 330 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 LINC00114Q6XXX2 140 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 CDC20BQ86Y33 519 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 HIST3H2BBQ8N257 126 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 LRRC25Q8N386 305 aaPredicted RBP13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 COMMD1Q8N668 190 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 ACBD4Q8NC06 268 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 SLC25A43Q8WUT9 341 aaPredicted RBP13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 C4orf45Q96LM5 186 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 CLEC1BQ9P126 229 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 WASF3Q9UPY6 502 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 SNRNP200O75643 2136 aaKnown RBP13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 CACNA1CQ13936 2221 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 A0A0A6YYH2 397 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 A6NJ64 397 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 ZNF726A6NNF4 738 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 MKRN2OSH3BPM6 223 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 ADAP1O75689 374 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 KAT7O95251 611 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 SOD3P08294 240 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 FCARP24071 287 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 HTR2CP28335 458 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 DRD3P35462 400 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 ZNF84P51523 738 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 RASGEF1BQ0VAM2 473 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 FOXO1Q12778 655 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 ISXQ2M1V0 245 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 GLYATL3Q5SZD4 288 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 PHF19Q5T6S3 580 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 GFI1BQ5VTD9 330 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 FJX1Q86VR8 437 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 GVQW1Q8N7I0 195 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 EXD3Q8N9H8 876 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 ZNF610Q8N9Z0 462 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 RCBTB1Q8NDN9 531 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 NTNG2Q96CW9 530 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 CUTCQ9NTM9 273 aa13.13□□□□□ -0.31
VPS9D1-201ENST00000389386 A0A1W2PP55 124 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 ACAA2P42765 397 aaKnown RBP13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 NUTF2P61970 127 aaKnown RBP13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 SLC22A6Q4U2R8 563 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 TCEAL6Q6IPX3 200 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 TTLL10Q6ZVT0 673 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 FAM219AQ8IW50 185 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 OR2A1Q8NGT9 310 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 CD300LFQ8TDQ1 290 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 DOK4Q8TEW6 326 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 MUCL1Q96DR8 90 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 DCBLD2Q96PD2 775 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 SUCNR1Q9BXA5 334 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 PARP12Q9H0J9 701 aaKnown RBP13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 RAB18Q9NP72 206 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 TMED3Q9Y3Q3 217 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 MRPS18BQ9Y676 258 aaKnown RBP13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 WIPF3A6NGB9 483 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 LDLRAD4O15165 306 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 SFTPBP07988 381 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 TBC1D3HP0C7X1 549 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 CRABP1P29762 137 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 RAB32Q13637 225 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 SSPNQ14714 243 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 TOMM34Q15785 309 aaPredicted RBP13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 MIDNQ504T8 468 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 TRMT12Q53H54 448 aaKnown RBP13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 MESTQ5EB52 335 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 WDR38Q5JTN6 314 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 AMZ2Q86W34 360 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 CARFQ8N187 725 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 OR6X1Q8NH79 312 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 AQP3Q92482 292 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 FGF14Q92915 247 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 EIF5A2Q9GZV4 153 aaKnown RBP13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 BCO1Q9HAY6 547 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 KCNK6Q9Y257 313 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 MMP24Q9Y5R2 645 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 HIST1H2BKO60814 126 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 HIST1H2BJP06899 126 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 HIST1H2BOP23527 126 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 HIST1H2BBP33778 126 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 HRH1P35367 487 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 SLC25A1P53007 311 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 HIST1H2BDP58876 126 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 TAS2R31P59538 309 aa13.12□□□□□ -0.31
VPS9D1-201ENST00000389386 HIST1H2BCP62807 126 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms