RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 POLR2J3Q9H1A7 115 aaKnown RBP-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 CXCL16Q9H2A7 254 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 GHITMQ9H3K2 345 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 LRRC19Q9H756 370 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 CALHM2Q9HA72 323 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 GSN-AS1Q9NRJ2 163 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 DDX28Q9NUL7 540 aaKnown RBP-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 DDIT4Q9NX09 232 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 TAS2R1Q9NYW7 299 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 TRPC4Q9UBN4 977 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 DDX25Q9UHL0 483 aaKnown RBP-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 EXOC7Q9UPT5 735 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 YARS2Q9Y2Z4 477 aaKnown RBP-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 MLH3Q9UHC1 1453 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 SIPA1L1O43166 1804 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 SCN8AQ9UQD0 1980 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 EEA1Q15075 1411 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 TRBV30A0A0K0K1B3 111 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 MMP24-AS1A0A0U1RRL7 71 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 FAM237BA0A1B0GVD1 139 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 A0A1W2PQF6 199 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 SLC5A10A0PJK1 596 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 FAM223BA6NKX1 122 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 KCNK1O00180 336 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 GABRPO00591 440 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 MAPK13O15264 365 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 RAD1O60671 282 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 FMO6PO60774 539 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 GMNNO75496 209 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 EIF3GO75821 320 aaKnown RBP eCLIP-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 CCNE2O96020 404 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 MT-CO2P00403 227 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 PENKP01210 267 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 JCHAINP01591 159 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 OPN1SWP03999 348 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 ABCB1P08183 1280 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 MYL3P08590 195 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 NMBP08949 121 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 IGHV3-43DP0DP04 118 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 CCL3P10147 92 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 LIPCP11150 499 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 PDHBP11177 359 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 MPZP25189 248 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 DCKP27707 260 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 ADORA2BP29275 332 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 GRPRP30550 384 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 KDELR2P33947 212 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 EPHX2P34913 555 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 EPS15P42566 896 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 CDKN2BP42772 138 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 CX3CR1P49238 355 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 EMP1P54849 157 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 DSCR4P56555 118 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 GFPT1Q06210 699 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 ZNF726P1Q15940 193 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 SFT2D3Q587I9 215 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 TMEM69Q5SWH9 247 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 DDX59Q5T1V6 619 aaKnown RBP eCLIP-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 MLIPQ5VWP3 458 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 ATG16L1Q676U5 607 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 SDIM1Q6ZPB5 146 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 RTL4Q6ZR62 310 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 FAM43BQ6ZT52 329 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 COX8CQ7Z4L0 72 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 VN1R4Q7Z5H5 301 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 LRRC28Q86X40 367 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 ARMC8Q8IUR7 673 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 APRG1Q8IVJ8 170 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 RIMKLAQ8IXN7 391 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 KLHL7Q8IXQ5 586 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 AMN1Q8IY45 258 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 TCEAL8Q8IYN2 117 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 APCDD1Q8J025 514 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 NUP35Q8NFH5 326 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR8H1Q8NGG4 311 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR8K1Q8NGG5 319 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR4P4Q8NGL7 312 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR13G1Q8NGZ3 307 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR10AC1Q8NH08 325 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 MFSD8Q8NHS3 518 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 LHFPL5Q8TAF8 219 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 ING5Q8WYH8 240 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 MAFIPQ8WZ33 124 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR1E3Q8WZA6 343 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 ATP6V0A1Q93050 837 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 MCHR2Q969V1 340 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 NTAN1Q96AB6 310 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 RAB7BQ96AH8 199 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 OTUB2Q96DC9 234 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 NEURL3Q96EH8 262 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 RNF125Q96EQ8 232 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 TPD52L3Q96J77 140 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 IGF2BP2-AS1Q96M15 143 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 Q96M85 177 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 TTC25Q96NG3 672 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 CPXM1Q96SM3 734 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 ATP5SQ99766 215 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 DERL1Q9BUN8 251 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 PRO3102Q9H379 93 aa-1.72□□□□□ -2.68
RNU6-540P-201ENST00000384622 SNX25Q9H3E2 840 aa-1.72□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms