RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 ZNRF4Q8WWF5 429 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 MCUR1Q96AQ8 359 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 SLCO4A1Q96BD0 722 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 MAP6Q96JE9 813 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 C1orf147Q96MC9 270 aaPredicted RBP11.85□□□□□ -0.51
SHOX-202ENST00000381575 ATF6BQ99941 703 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 TMEM246Q9BRR3 403 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 MRI1Q9BV20 369 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 CDADC1Q9BWV3 514 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 SSBP3Q9BWW4 388 aaPredicted RBP11.85□□□□□ -0.51
SHOX-202ENST00000381575 HCAR1Q9BXC0 346 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 NSRP1Q9H0G5 558 aaKnown RBP11.85□□□□□ -0.51
SHOX-202ENST00000381575 PNRC2Q9NPJ4 139 aaKnown RBP11.85□□□□□ -0.51
SHOX-202ENST00000381575 DDX28Q9NUL7 540 aaKnown RBP11.85□□□□□ -0.51
SHOX-202ENST00000381575 UFSP2Q9NUQ7 469 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 CD300AQ9UGN4 299 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 CYB5R1Q9UHQ9 305 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 TMCC3Q9ULS5 477 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 POLR3KQ9Y2Y1 108 aaPredicted RBP11.85□□□□□ -0.51
SHOX-202ENST00000381575 EGR1P18146 543 aa11.84□□□□□ -0.51
SHOX-202ENST00000381575 SAMD4BQ5PRF9 694 aaKnown RBP11.84□□□□□ -0.51
SHOX-202ENST00000381575 SLC27A4Q6P1M0 643 aa11.84□□□□□ -0.51
SHOX-202ENST00000381575 LYPD2Q6UXB3 125 aa11.84□□□□□ -0.51
SHOX-202ENST00000381575 CYP2R1Q6VVX0 501 aa11.84□□□□□ -0.51
SHOX-202ENST00000381575 RBMS3Q6XE24 437 aaKnown RBP11.84□□□□□ -0.51
SHOX-202ENST00000381575 COLCA1Q6ZS62 124 aa11.84□□□□□ -0.51
SHOX-202ENST00000381575 CPLX4Q7Z7G2 160 aa11.84□□□□□ -0.51
SHOX-202ENST00000381575 ZBTB46Q86UZ6 589 aa11.84□□□□□ -0.51
SHOX-202ENST00000381575 PGAM4Q8N0Y7 254 aa11.84□□□□□ -0.51
SHOX-202ENST00000381575 OR10S1Q8NGN2 331 aa11.84□□□□□ -0.51
SHOX-202ENST00000381575 OR2AE1Q8NHA4 323 aa11.84□□□□□ -0.51
SHOX-202ENST00000381575 GNPDA2Q8TDQ7 276 aa11.84□□□□□ -0.51
SHOX-202ENST00000381575 BTBD10Q9BSF8 475 aa11.84□□□□□ -0.51
SHOX-202ENST00000381575 TMEM100Q9NV29 134 aa11.84□□□□□ -0.51
SHOX-202ENST00000381575 LRCH1Q9Y2L9 728 aa11.84□□□□□ -0.51
SHOX-202ENST00000381575 PCDHGB1Q9Y5G3 927 aa11.84□□□□□ -0.51
SHOX-202ENST00000381575 MDFIC2A0A1B0GVS7 189 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 FAM20BO75063 409 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 ATP6V1B2P21281 511 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 GNB2P62879 340 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 PAX2Q02962 417 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 TSPAN31Q12999 210 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 MAB21L1Q13394 359 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 MPPED2Q15777 294 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 SNAI3Q3KNW1 292 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 SLC36A3Q495N2 470 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 DOK3Q7L591 496 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 DEFB107AQ8IZN7 70 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 PROKR2Q8NFJ6 384 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 OR8D4Q8NGM9 314 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 OR9Q1Q8NGQ5 310 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 NTN4Q9HB63 628 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 IL1RAPQ9NPH3 570 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 TAGLN3Q9UI15 199 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 N6AMT1Q9Y5N5 214 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 CMYA5Q8N3K9 4069 aa11.83□□□□□ -0.52
SHOX-202ENST00000381575 TRAV40A0A0B4J280 105 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 IGHV2-70DA0A0C4DH43 119 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 M0R135 149 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 SPRY1O43609 319 aaPredicted RBP11.82□□□□□ -0.52
SHOX-202ENST00000381575 GYPBP06028 91 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 CA6P23280 308 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 IFNGR2P38484 337 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 PITPNBP48739 271 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 MXRA7P84157 204 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 PAX8Q06710 450 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 BAMBIQ13145 260 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 ZNF404Q494X3 552 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 PGAP1Q75T13 922 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 MRPL21Q7Z2W9 205 aaKnown RBP11.82□□□□□ -0.52
SHOX-202ENST00000381575 PARP8Q8N3A8 854 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 LNX2Q8N448 690 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 BOLLQ8N9W6 283 aaKnown RBP11.82□□□□□ -0.52
SHOX-202ENST00000381575 SPRYD4Q8WW59 207 aaPredicted RBP11.82□□□□□ -0.52
SHOX-202ENST00000381575 NEIL1Q96FI4 390 aaPredicted RBP11.82□□□□□ -0.52
SHOX-202ENST00000381575 ZNF799Q96GE5 643 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 MS4A7Q9GZW8 240 aaPredicted RBP11.82□□□□□ -0.52
SHOX-202ENST00000381575 VNN3Q9NY84 501 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 LYVE1Q9Y5Y7 322 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 CDH10Q9Y6N8 788 aa11.82□□□□□ -0.52
SHOX-202ENST00000381575 LRRC30A6NM36 301 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 IFNL4K9M1U5 179 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 BHLHE40O14503 412 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 IDH3BO43837 385 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 SOX14O95416 240 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 SLC2A1P11166 492 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 ZNF823P16415 610 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 PRTN3P24158 256 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 TPTEP56180 551 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 ZNF92Q03936 586 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 ECH1Q13011 328 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 MALLQ13021 153 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 OR8G1Q15617 311 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 TUSC1Q2TAM9 212 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 SPATC1Q76KD6 591 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 OR8B3Q8NGG8 313 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 OR52L1Q8NGH7 329 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 OR8B2Q96RD0 313 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 DDOQ99489 341 aa11.81□□□□□ -0.52
SHOX-202ENST00000381575 ADAT1Q9BUB4 502 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms