RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 LPAL2Q16609 132 aa14.49□□□□□ -0.09
NKX3-1-201ENST00000380871 NKAIN1Q4KMZ8 207 aa14.49□□□□□ -0.09
NKX3-1-201ENST00000380871 RNASE10Q5GAN6 216 aaKnown RBP14.49□□□□□ -0.09
NKX3-1-201ENST00000380871 PAQR4Q8N4S7 273 aaPredicted RBP14.49□□□□□ -0.09
NKX3-1-201ENST00000380871 OR52N4Q8NGI2 321 aa14.49□□□□□ -0.09
NKX3-1-201ENST00000380871 FGGYQ96C11 551 aa14.49□□□□□ -0.09
NKX3-1-201ENST00000380871 EMC6Q9BV81 110 aa14.49□□□□□ -0.09
NKX3-1-201ENST00000380871 MED29Q9NX70 200 aa14.49□□□□□ -0.09
NKX3-1-201ENST00000380871 COMMD9Q9P000 198 aa14.49□□□□□ -0.09
NKX3-1-201ENST00000380871 MBD2Q9UBB5 411 aa14.49□□□□□ -0.09
NKX3-1-201ENST00000380871 PCDHB10Q9UN67 800 aa14.49□□□□□ -0.09
NKX3-1-201ENST00000380871 CACNA1EQ15878 2313 aa14.49□□□□□ -0.09
NKX3-1-201ENST00000380871 TRBV11-1A0A0K0K1C0 115 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 TMEM269A0A1B0GVZ9 245 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 HSPB2A8KAH6 182 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 RAB27BO00194 218 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 TSPAN2O60636 221 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 SCRG1O75711 98 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 AHSA1O95433 338 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 ZBTB25P24278 435 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 AGTR1P30556 359 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 GLO1Q04760 184 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 ZNF169Q14929 603 aaPredicted RBP14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 HSPB2Q16082 182 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 C5orf34Q96MH7 638 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 ASF1BQ9NVP2 202 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 R4GMQ9 66 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 SULT1C2O00338 296 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 BDKRB2P30411 391 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 GNALP38405 381 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 CASRP41180 1078 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 SLC6A8P48029 635 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 ROBO4Q8WZ75 1007 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 ZNF416Q9BWM5 594 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 KLRF1Q9NZS2 232 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 FER1L5A0AVI2 2057 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 WDFY4Q6ZS81 3184 aa14.48□□□□□ -0.09
NKX3-1-201ENST00000380871 F5H0A9 414 aaPredicted RBP14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 SULT2B1O00204 365 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 NPIPB7O75200 414 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 DXOO77932 396 aaKnown RBP14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 GP1BAP07359 652 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 FSTP19883 344 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 IL13RA1P78552 427 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 FOXK1P85037 733 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 CHRDQ9H2X0 955 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 SCPEP1Q9HB40 452 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 C13orf42A0A1B0GVH6 325 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 C9orf170A2RU37 121 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 ALG1L2C9J202 215 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 SIGLEC6O43699 453 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 IL32P24001 234 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 ZNF260Q3ZCT1 412 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 LYG2Q86SG7 212 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 ST7LQ8TDW4 575 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 AQP3Q92482 292 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 MVB12AQ96EY5 273 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 NKX6-2Q9C056 277 aaPredicted RBP14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 TTLL8A6PVC2 850 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 ERCC1P07992 297 aaPredicted RBP14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 SRSF3P84103 164 aaKnown RBP14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 SNTB1Q13884 538 aaKnown RBP14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 SHBQ15464 509 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 BHLHE23Q8NDY6 225 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 SLC26A10Q8NG04 563 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 ADAT3Q96EY9 351 aaPredicted RBP14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 NICN1Q9BSH3 213 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 FAM117AQ9C073 453 aa14.47□□□□□ -0.09
NKX3-1-201ENST00000380871 PHF3Q92576 2039 aaKnown RBP14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 A0A1W2PQM1 296 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 STK17BO94768 372 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 PMP2P02689 132 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 ANOS1P23352 680 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 EMP2P54851 167 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 STARD6P59095 220 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 FGL1Q08830 312 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 LYSMD4Q5XG99 296 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 LCN10Q6JVE6 187 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 SLC25A42Q86VD7 318 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 LYPD6Q86Y78 171 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 CLRN3Q8NCR9 226 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 PATE3B3GLJ2 98 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 MASP2O00187 686 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 OR2F2O95006 317 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 F12P00748 615 aaPredicted RBP14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 PRKACAP17612 351 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 RIPPLY1Q0D2K3 151 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 OR2F1Q13607 317 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 TOMM20Q15388 145 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 GUCA2BQ16661 112 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 ACOT7LQ6ZUV0 252 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 COX15Q7KZN9 410 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 THRSPQ92748 146 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 WNT16Q9UBV4 365 aa14.46□□□□□ -0.09
NKX3-1-201ENST00000380871 DISC1C4P0D8 188 aa14.46□□□□□ -0.1
NKX3-1-201ENST00000380871 FADS1O60427 444 aa14.46□□□□□ -0.1
NKX3-1-201ENST00000380871 ADCYAP1P18509 176 aa14.46□□□□□ -0.1
NKX3-1-201ENST00000380871 PRKXP51817 358 aa14.46□□□□□ -0.1
NKX3-1-201ENST00000380871 POLR2HP52434 150 aaKnown RBP14.46□□□□□ -0.1
NKX3-1-201ENST00000380871 PDSS1Q5T2R2 415 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms