RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 BEST4Q8NFU0 473 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 OR10S1Q8NGN2 331 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 ST8SIA2Q92186 375 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 FGGYQ96C11 551 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 TAAR9Q96RI9 348 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 OR10A4Q9H209 315 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 GPN1Q9HCN4 374 aaPredicted RBP11.19□□□□□ -0.62
VPS16-202ENST00000380445 MRPS18BQ9Y676 258 aaKnown RBP11.19□□□□□ -0.62
VPS16-202ENST00000380445 NPIPA2E9PIF3 369 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 NPIPA3F8WFD2 350 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 HPP00738 406 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 ERCC1P07992 297 aaPredicted RBP11.19□□□□□ -0.62
VPS16-202ENST00000380445 RAB6AP20340 208 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 GNALP38405 381 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 LSM6P62312 80 aaKnown RBP11.19□□□□□ -0.62
VPS16-202ENST00000380445 TMEM255AQ5JRV8 349 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 C9orf62Q8N4C0 152 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 OR51A2Q8NGJ7 313 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 UTP23Q9BRU9 249 aaKnown RBP11.19□□□□□ -0.62
VPS16-202ENST00000380445 ARRDC1-AS1Q9H2J1 176 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 SLCO5A1Q9H2Y9 848 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 TMEM138Q9NPI0 162 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 IFT46Q9NQC8 304 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 CGGBP1Q9UFW8 167 aaPredicted RBP11.19□□□□□ -0.62
VPS16-202ENST00000380445 MEIKINA0A087WXM9 373 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 METTL21EPA6NDL7 271 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 DNPH1O43598 174 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 RAMP1O60894 148 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 NDUFB6O95139 128 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 ALDOBP05062 364 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 AKAIN1P0CW23 69 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 CXCL3P19876 107 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 OTX2P32243 289 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 CDAP32320 146 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 CSNK1A1P48729 337 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 VEGFCP49767 419 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 GRB2P62993 217 aaKnown RBP11.18□□□□□ -0.62
VPS16-202ENST00000380445 MFAP5Q13361 173 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 RBMS2Q15434 407 aaKnown RBP11.18□□□□□ -0.62
VPS16-202ENST00000380445 RAB11FIP2Q7L804 512 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 OR6N1Q8NGY5 312 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 ZNF431Q8TF32 576 aaPredicted RBP11.18□□□□□ -0.62
VPS16-202ENST00000380445 ST8SIA4Q92187 359 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 PNPLA2Q96AD5 504 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 INTS12Q96CB8 462 aaKnown RBP11.18□□□□□ -0.62
VPS16-202ENST00000380445 ASH2LQ9UBL3 628 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 SPEGQ15772 3267 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 ZNF98A6NK75 572 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 ARPC1BO15143 372 aaKnown RBP11.18□□□□□ -0.62
VPS16-202ENST00000380445 DOK2O60496 412 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 MECP2P51608 486 aaKnown RBP11.18□□□□□ -0.62
VPS16-202ENST00000380445 GRK1Q15835 563 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 LINC00303Q3SY05 128 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 RAB12Q6IQ22 244 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 ZNF813Q6ZN06 617 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 PPP1R32Q7Z5V6 425 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 SLC22A24Q8N4F4 322 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 LOXL4Q96JB6 756 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 NECAB3Q96P71 396 aaPredicted RBP11.18□□□□□ -0.62
VPS16-202ENST00000380445 DDA1Q9BW61 102 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 BEX1Q9HBH7 125 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 FLVCR2Q9UPI3 526 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 FARSAQ9Y285 508 aaKnown RBP11.18□□□□□ -0.62
VPS16-202ENST00000380445 PCDHGA5Q9Y5G8 931 aa11.18□□□□□ -0.62
VPS16-202ENST00000380445 M0R296 226 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 LDLRAD4O15165 306 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 KDM4BO94953 1096 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 IL5P05113 134 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 GTF2F2P13984 249 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 ZNF20P17024 532 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 RAB3AP20336 220 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 SRD5A2P31213 254 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 CLDN6P56747 220 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 C10orf128Q5T292 105 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 TCEAL6Q6IPX3 200 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 GLDNQ6ZMI3 551 aaPredicted RBP11.17□□□□□ -0.62
VPS16-202ENST00000380445 ZNF627Q7L945 461 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 OR1M1Q8NGA1 313 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 GPX8Q8TED1 209 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 KCNE4Q8WWG9 221 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 TCEAL3Q969E4 200 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 NELFAQ9H3P2 528 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 ZFP64Q9NPA5 681 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 RAB22AQ9UL26 194 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 NCOR1O75376 2440 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 SCGNO76038 276 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 HPXP02790 462 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 LPLP06858 475 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 JMJD7P0C870 316 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 SP9P0CG40 484 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 MSR1P21757 451 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 PGAP1Q75T13 922 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 LYPD6Q86Y78 171 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 OR52H1Q8NGJ2 320 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 TMEM54Q969K7 222 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 METTL17Q9H7H0 456 aaPredicted RBP11.17□□□□□ -0.62
VPS16-202ENST00000380445 MGAT4AQ9UM21 535 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 EML6Q6ZMW3 1958 aa11.17□□□□□ -0.62
VPS16-202ENST00000380445 SNRPGP15A8MWD9 76 aa11.16□□□□□ -0.62
VPS16-202ENST00000380445 G3V3Y1 287 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms