RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 ERVK-18Q9QC07 812 aa12.02□□□□□ -0.49
UPK1A-202ENST00000379013 ST6GALNAC2Q9UJ37 374 aa12.02□□□□□ -0.49
UPK1A-202ENST00000379013 NAV3Q8IVL0 2385 aa12.02□□□□□ -0.49
UPK1A-202ENST00000379013 TMEM269A0A1B0GVZ9 245 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 F5H5K5 113 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 LOC110117498-PIK3R3F6TDL0 507 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 ICMTO60725 284 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 MT-ND2P03891 347 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 HTR1AP08908 422 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 CECR9P0C854 216 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 CCNOP22674 350 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 CX3CR1P49238 355 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 ETV1P50549 477 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 MMP16P51512 607 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 HCCSP53701 268 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 MALLQ13021 153 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 MED22Q15528 200 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 LIPNQ5VXI9 398 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 ALKBH2Q6NS38 261 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 SPATC1Q76KD6 591 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 NANOGP1Q8N7R0 232 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 CPEB3Q8NE35 698 aaKnown RBP12.01□□□□□ -0.49
UPK1A-202ENST00000379013 FGFBP3Q8TAT2 258 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 POM121L2Q96KW2 1035 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 SIGLEC11Q96RL6 698 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 RHNO1Q9BSD3 238 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 COMMD4Q9H0A8 199 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 RGCCQ9H4X1 137 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 ISYNA1Q9NPH2 558 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 TBCCD1Q9NVR7 557 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 SLCO1C1Q9NYB5 712 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 KLHDC2Q9Y2U9 406 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 R4GMQ9 66 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 ANK3Q12955 4377 aaKnown RBP12.01□□□□□ -0.49
UPK1A-202ENST00000379013 CADP27708 2225 aa12.01□□□□□ -0.49
UPK1A-202ENST00000379013 TLN2Q9Y4G6 2542 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 IGHV1-18A0A0C4DH31 117 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 ZNF503-AS2A6NEH8 195 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 DEFB108AA8MXU0 73 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 H3BSA7 217 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 XRCC2O43543 280 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 ANXA2P07355 339 aaKnown RBP12□□□□□ -0.49
UPK1A-202ENST00000379013 CD3EP07766 207 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 CD40P25942 277 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 LOXP28300 417 aaPredicted RBP12□□□□□ -0.49
UPK1A-202ENST00000379013 TGM4P49221 684 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 NAAAQ02083 359 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 ACSM1Q08AH1 577 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 SPHARQ15513 63 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 TP53I3Q53FA7 332 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 ZNF684Q5T5D7 378 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 BCL2L15Q5TBC7 163 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 OTPQ5XKR4 325 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 RPL22L1Q6P5R6 122 aaKnown RBP12□□□□□ -0.49
UPK1A-202ENST00000379013 SSX6Q7RTT6 188 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 ZNF584Q8IVC4 421 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 CCDC54Q8NEL0 328 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 OR10S1Q8NGN2 331 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 SMAP2Q8WU79 429 aaPredicted RBP12□□□□□ -0.49
UPK1A-202ENST00000379013 THRSPQ92748 146 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 RORBQ92753 470 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 C4orf45Q96LM5 186 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 ZNF75AQ96N20 296 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 AMELYQ99218 206 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 MRPS26Q9BYN8 205 aaKnown RBP12□□□□□ -0.49
UPK1A-202ENST00000379013 TTTY10Q9BZA0 68 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 OR10A2Q9H208 303 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 CXXC4Q9H2H0 198 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 NOX3Q9HBY0 568 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 BABAM2Q9NXR7 383 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 MRM2Q9UI43 246 aaKnown RBP12□□□□□ -0.49
UPK1A-202ENST00000379013 SCOCQ9UIL1 159 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 GRIP1Q9Y3R0 1128 aa12□□□□□ -0.49
UPK1A-202ENST00000379013 USF3Q68DE3 2245 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 CSPG4Q6UVK1 2322 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 TMEM212A6NML5 194 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 LCATP04180 440 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 THBDP07204 575 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 ACSM4P0C7M7 580 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 UBCP0CG48 685 aaKnown RBP11.99□□□□□ -0.49
UPK1A-202ENST00000379013 PSKH1P11801 424 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 ZNF12P17014 697 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 CCR9P51686 369 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 PRKXP51817 358 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 OR12D2P58182 307 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 SELENOVP59797 346 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 IRF3Q14653 427 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 KRTAP27-1Q3LI81 207 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 FDX2Q6P4F2 183 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 ZNF704Q6ZNC4 412 aaPredicted RBP11.99□□□□□ -0.49
UPK1A-202ENST00000379013 SPARTQ8N0X7 666 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 RFLNBQ8N5W9 214 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 SPRYD4Q8WW59 207 aaPredicted RBP11.99□□□□□ -0.49
UPK1A-202ENST00000379013 AKAP1Q92667 903 aaKnown RBP eCLIP11.99□□□□□ -0.49
UPK1A-202ENST00000379013 PGAM5Q96HS1 289 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 HS3ST6Q96QI5 342 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 C1QTNF6Q9BXI9 259 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 ACOT13Q9NPJ3 140 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 ACOXLQ9NUZ1 547 aa11.99□□□□□ -0.49
UPK1A-202ENST00000379013 NPAP1Q9NZP6 1156 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms