RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 CD3GP09693 182 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 UBCP0CG48 685 aaKnown RBP11.04□□□□□ -0.64
CLCN6-206ENST00000376496 IGF2RP11717 2491 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 EIF2S3P41091 472 aaKnown RBP11.04□□□□□ -0.64
CLCN6-206ENST00000376496 PITPNBP48739 271 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 SRP9P49458 86 aaKnown RBP11.04□□□□□ -0.64
CLCN6-206ENST00000376496 DGCR2P98153 550 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 FAPQ12884 760 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 TRIQKQ629K1 86 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 OR10K2Q6IF99 312 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 BIVMQ86UB2 503 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 MCEMP1Q8IX19 187 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 JAGN1Q8N5M9 183 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 CPT1CQ8TCG5 803 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 PGAM5Q96HS1 289 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 MMP28Q9H239 520 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 ZNF275Q9NSD4 429 aaPredicted RBP11.04□□□□□ -0.64
CLCN6-206ENST00000376496 IGKV3D-15A0A087WSY6 115 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 TRAV17A0A0B4J275 112 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 A0A1B0GVI7 797 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 SGCEO43556 437 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 APOA1P02647 267 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 DEFA1P59665 94 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 DEFA3P59666 94 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 SNAI3Q3KNW1 292 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 OR2AE1Q8NHA4 323 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 LYZL4Q96KX0 146 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 KCNJ15Q99712 375 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 AUNIPQ9H7T9 357 aa11.04□□□□□ -0.64
CLCN6-206ENST00000376496 ZNF503-AS2A6NEH8 195 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 IGFBP3P17936 291 aaPredicted RBP11.03□□□□□ -0.64
CLCN6-206ENST00000376496 PSG4Q00888 419 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 SCN1BQ07699 218 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 GLYATL3Q5SZD4 288 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 ZNF57Q68EA5 555 aaPredicted RBP11.03□□□□□ -0.64
CLCN6-206ENST00000376496 SLC16A14Q7RTX9 510 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 CKLFQ9UBR5 152 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 RP1L1Q8IWN7 2480 aaPredicted RBP11.03□□□□□ -0.64
CLCN6-206ENST00000376496 SLC22A20A6NK97 555 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 HLA-HP01893 362 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 FCER2P06734 321 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 CCL2P13500 99 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 HIST1H3AP68431 136 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 UBE2NLQ5JXB2 153 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 HIST2H3PS2Q5TEC6 136 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 HIST2H3AQ71DI3 136 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 OR52N4Q8NGI2 321 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 SNIP1Q8TAD8 396 aaKnown RBP11.03□□□□□ -0.64
CLCN6-206ENST00000376496 NPRL2Q8WTW4 380 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 MRPL15Q9P015 296 aaKnown RBP11.03□□□□□ -0.64
CLCN6-206ENST00000376496 STEAP1Q9UHE8 339 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 MYO7BQ6PIF6 2116 aa11.03□□□□□ -0.64
CLCN6-206ENST00000376496 M0R135 149 aa11.02□□□□□ -0.64
CLCN6-206ENST00000376496 CEACAM4O75871 244 aa11.02□□□□□ -0.64
CLCN6-206ENST00000376496 KDM4BO94953 1096 aa11.02□□□□□ -0.64
CLCN6-206ENST00000376496 YES1P07947 543 aa11.02□□□□□ -0.64
CLCN6-206ENST00000376496 DCTDP32321 178 aa11.02□□□□□ -0.64
CLCN6-206ENST00000376496 POU3F4P49335 361 aa11.02□□□□□ -0.64
CLCN6-206ENST00000376496 BCAP31P51572 246 aa11.02□□□□□ -0.64
CLCN6-206ENST00000376496 GRB2P62993 217 aaKnown RBP11.02□□□□□ -0.64
CLCN6-206ENST00000376496 ZNF100Q8IYN0 542 aa11.02□□□□□ -0.64
CLCN6-206ENST00000376496 CADM3Q8N126 398 aa11.02□□□□□ -0.64
CLCN6-206ENST00000376496 TMEM45BQ96B21 275 aa11.02□□□□□ -0.64
CLCN6-206ENST00000376496 APH1AQ96BI3 265 aa11.02□□□□□ -0.64
CLCN6-206ENST00000376496 ZNF799Q96GE5 643 aa11.02□□□□□ -0.64
CLCN6-206ENST00000376496 THAP7Q9BT49 309 aaPredicted RBP11.02□□□□□ -0.64
CLCN6-206ENST00000376496 ARHGAP21Q5T5U3 1957 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 HTR5AP47898 357 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 BCL2A1Q16548 175 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 C2orf76Q3KRA6 126 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 C19orf18Q8NEA5 215 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 OR4D6Q8NGJ1 314 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 TRIB1Q96RU8 372 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 WNT5BQ9H1J7 359 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 NIPAL2Q9H841 368 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 PAQR5Q9NXK6 330 aaPredicted RBP11.02□□□□□ -0.65
CLCN6-206ENST00000376496 EMC3Q9P0I2 261 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 UPB1Q9UBR1 384 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 SYNGR3O43761 229 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 PTTG1O95997 202 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 CDK2P24941 298 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 RAB11BQ15907 218 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 ZADH2Q8N4Q0 377 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 FAM3DQ96BQ1 224 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 BCO1Q9HAY6 547 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 NOX3Q9HBY0 568 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 ZNF224Q9NZL3 707 aa11.02□□□□□ -0.65
CLCN6-206ENST00000376496 CST2P09228 141 aa11.01□□□□□ -0.65
CLCN6-206ENST00000376496 CPN1P15169 458 aa11.01□□□□□ -0.65
CLCN6-206ENST00000376496 ZNF20P17024 532 aa11.01□□□□□ -0.65
CLCN6-206ENST00000376496 INPP1P49441 399 aa11.01□□□□□ -0.65
CLCN6-206ENST00000376496 RIPPLY2Q5TAB7 128 aa11.01□□□□□ -0.65
CLCN6-206ENST00000376496 KRT74Q7RTS7 529 aa11.01□□□□□ -0.65
CLCN6-206ENST00000376496 CPEB3Q8NE35 698 aaKnown RBP11.01□□□□□ -0.65
CLCN6-206ENST00000376496 OR1F12Q8NHA8 337 aa11.01□□□□□ -0.65
CLCN6-206ENST00000376496 OR2H1Q9GZK4 316 aa11.01□□□□□ -0.65
CLCN6-206ENST00000376496 SP140LQ9H930 580 aa11.01□□□□□ -0.65
CLCN6-206ENST00000376496 FAHP16930 419 aa11.01□□□□□ -0.65
CLCN6-206ENST00000376496 CCNOP22674 350 aa11.01□□□□□ -0.65
CLCN6-206ENST00000376496 PABPC1L2AQ5JQF8 200 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms