RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 OR2T1O43869 369 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 UTS2O95399 124 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 IL2RAP01589 272 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 GLAP06280 429 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 CELA2BP08218 269 aaPredicted RBP9.91□□□□□ -0.82
CCDC40-203ENST00000374877 HLA-GP17693 338 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 ARRB1P49407 418 aaPredicted RBP9.91□□□□□ -0.82
CCDC40-203ENST00000374877 PPM1FP49593 454 aaPredicted RBP9.91□□□□□ -0.82
CCDC40-203ENST00000374877 TOMM34Q15785 309 aaPredicted RBP9.91□□□□□ -0.82
CCDC40-203ENST00000374877 ARMC6Q6NXE6 501 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 CATSPERDQ86XM0 798 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 DTWD2Q8NBA8 298 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 SLC37A2Q8TED4 501 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 ROBO4Q8WZ75 1007 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 UQCC1Q9NVA1 299 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 CARHSP1Q9Y2V2 147 aaKnown RBP9.91□□□□□ -0.82
CCDC40-203ENST00000374877 VCANP13611 3396 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 PMP2P02689 132 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 IGFBP3P17936 291 aaPredicted RBP9.91□□□□□ -0.82
CCDC40-203ENST00000374877 GNALP38405 381 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 INSM1Q01101 510 aaPredicted RBP9.91□□□□□ -0.82
CCDC40-203ENST00000374877 MICBQ29980 383 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 ZNF585AQ6P3V2 769 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 C17orf82Q86X59 251 aaPredicted RBP9.91□□□□□ -0.82
CCDC40-203ENST00000374877 ZDHHC22Q8N966 263 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 STOML3Q8TAV4 291 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 MARCH1Q8TCQ1 289 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 SFT2D1Q8WV19 159 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 RRNAD1Q96FB5 475 aaKnown RBP9.91□□□□□ -0.82
CCDC40-203ENST00000374877 UQCC2Q9BRT2 126 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 CRB3Q9BUF7 120 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 EDARQ9UNE0 448 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 A0A0A6YYH2 397 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 A6NJ64 397 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 LMO7DNF2Z398 122 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 EFSO43281 561 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 GNB3P16520 340 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 FNDC7Q5VTL7 733 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 PEAR1Q5VY43 1037 aaPredicted RBP9.9□□□□□ -0.82
CCDC40-203ENST00000374877 ZNF321PQ8N8H1 164 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 ZNF615Q8N8J6 731 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 ZSCAN1Q8NBB4 408 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 AQP3Q92482 292 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 GAL3ST4Q96RP7 486 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 NXF5Q9H1B4 397 aaKnown RBP9.9□□□□□ -0.82
CCDC40-203ENST00000374877 SLC2A8Q9NY64 477 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 PRODH2Q9UF12 536 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 ZNF107Q9UII5 783 aaPredicted RBP9.9□□□□□ -0.82
CCDC40-203ENST00000374877 TEX13DA0A0J9YY54 714 aaPredicted RBP9.9□□□□□ -0.82
CCDC40-203ENST00000374877 WIPF3A6NGB9 483 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 C17orf105B2RV13 164 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 RAB27BO00194 218 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 P2RY10O00398 339 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 LDLRAD4O15165 306 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 DUS4LO95620 317 aaKnown RBP9.9□□□□□ -0.82
CCDC40-203ENST00000374877 FSTP19883 344 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 FASLGP48023 281 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 RPL27P61353 136 aaKnown RBP9.9□□□□□ -0.82
CCDC40-203ENST00000374877 FUT7Q11130 342 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 C1orf61Q13536 156 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 ZNF260Q3ZCT1 412 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.9□□□□□ -0.82
CCDC40-203ENST00000374877 OGFOD3Q6PK18 319 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 LINC00346Q8IVM7 164 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 TMEM105Q8N8V8 129 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 ZSCAN4Q8NAM6 433 aaPredicted RBP9.9□□□□□ -0.82
CCDC40-203ENST00000374877 SLC30A7Q8NEW0 376 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 LMX1AQ8TE12 382 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 C8orf44Q96CB5 159 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 MMABQ96EY8 250 aaPredicted RBP9.9□□□□□ -0.82
CCDC40-203ENST00000374877 CNTD2Q9H8S5 307 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 MMP26Q9NRE1 261 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 PRR13Q9NZ81 148 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 COA3Q9Y2R0 106 aaPredicted RBP9.9□□□□□ -0.82
CCDC40-203ENST00000374877 EYSQ5T1H1 3165 aa9.9□□□□□ -0.82
CCDC40-203ENST00000374877 PQLC2LA1A4F0 135 aa9.9□□□□□ -0.83
CCDC40-203ENST00000374877 CD79AP11912 226 aa9.9□□□□□ -0.83
CCDC40-203ENST00000374877 DCDP81605 110 aaKnown RBP9.9□□□□□ -0.83
CCDC40-203ENST00000374877 ROM1Q03395 351 aa9.9□□□□□ -0.83
CCDC40-203ENST00000374877 RBM39Q14498 530 aaKnown RBP9.9□□□□□ -0.83
CCDC40-203ENST00000374877 GFOD2Q3B7J2 385 aa9.9□□□□□ -0.83
CCDC40-203ENST00000374877 PGAP1Q75T13 922 aa9.9□□□□□ -0.83
CCDC40-203ENST00000374877 MAMDC2Q7Z304 686 aaPredicted RBP9.9□□□□□ -0.83
CCDC40-203ENST00000374877 RTN4RL2Q86UN3 420 aa9.9□□□□□ -0.83
CCDC40-203ENST00000374877 TMEM200AQ86VY9 491 aa9.9□□□□□ -0.83
CCDC40-203ENST00000374877 OR52N5Q8NH56 324 aa9.9□□□□□ -0.83
CCDC40-203ENST00000374877 ZC3H10Q96K80 434 aaKnown RBP9.9□□□□□ -0.83
CCDC40-203ENST00000374877 RTN4RQ9BZR6 473 aa9.9□□□□□ -0.83
CCDC40-203ENST00000374877 OR8D2Q9GZM6 311 aa9.9□□□□□ -0.83
CCDC40-203ENST00000374877 PNO1Q9NRX1 252 aaKnown RBP9.9□□□□□ -0.83
CCDC40-203ENST00000374877 SLC22A11Q9NSA0 550 aa9.9□□□□□ -0.83
CCDC40-203ENST00000374877 CENPMQ9NSP4 180 aa9.9□□□□□ -0.83
CCDC40-203ENST00000374877 SEC16AO15027 2179 aa9.9□□□□□ -0.83
CCDC40-203ENST00000374877 CDC14CA4D256 554 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 MSGN1A6NI15 193 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 F8VVB4 439 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 F8VWA3 439 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 AGPAT2O15120 278 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 PIAS2O75928 621 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 ABOP16442 354 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms