RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 OR51J1Q9H342 316 aa16.23■□□□□ 0.19
RXRB-202ENST00000374685 MRPS18BQ9Y676 258 aaKnown RBP16.23■□□□□ 0.19
RXRB-202ENST00000374685 TRAPPC6AO75865 159 aa16.23■□□□□ 0.19
RXRB-202ENST00000374685 TOXO94900 526 aa16.23■□□□□ 0.19
RXRB-202ENST00000374685 ONECUT2O95948 504 aa16.23■□□□□ 0.19
RXRB-202ENST00000374685 DNASE1P24855 282 aa16.23■□□□□ 0.19
RXRB-202ENST00000374685 BAIAP2L2Q6UXY1 529 aa16.23■□□□□ 0.19
RXRB-202ENST00000374685 RAB11FIP2Q7L804 512 aa16.23■□□□□ 0.19
RXRB-202ENST00000374685 OR10S1Q8NGN2 331 aa16.23■□□□□ 0.19
RXRB-202ENST00000374685 C1orf198Q9H425 327 aa16.23■□□□□ 0.19
RXRB-202ENST00000374685 NCOA6Q14686 2063 aaPredicted RBP16.22■□□□□ 0.19
RXRB-202ENST00000374685 MEIKINA0A087WXM9 373 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 CTAG2O75638 210 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 HPXP02790 462 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 ALDOBP05062 364 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 PGA4P0DJD7 388 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 PGA3P0DJD8 388 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 P2RY4P51582 365 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 TRA2AQ13595 282 aaKnown RBP eCLIP16.22■□□□□ 0.19
RXRB-202ENST00000374685 ST3GAL2Q16842 350 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 PEAR1Q5VY43 1037 aaPredicted RBP16.22■□□□□ 0.19
RXRB-202ENST00000374685 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.22■□□□□ 0.19
RXRB-202ENST00000374685 OR4D10Q8NGI6 311 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 OR51E1Q8TCB6 317 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 ZNF385AQ96PM9 386 aaKnown RBP16.22■□□□□ 0.19
RXRB-202ENST00000374685 CHIAQ9BZP6 476 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 ZNF436Q9C0F3 470 aaPredicted RBP16.22■□□□□ 0.19
RXRB-202ENST00000374685 LHFPL6Q9Y693 200 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 TMEM272A0A1B0GTI8 110 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 DNASE2O00115 360 aaPredicted RBP16.22■□□□□ 0.19
RXRB-202ENST00000374685 SYT7O43581 403 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 TMPPEQ6ZT21 453 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 UXS1Q8NBZ7 420 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 OR13C9Q8NGT0 318 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 RNF138Q8WVD3 245 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 FAM71F1Q96KD3 344 aaPredicted RBP16.22■□□□□ 0.19
RXRB-202ENST00000374685 SEC22CQ9BRL7 303 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 MRPL13Q9BYD1 178 aaKnown RBP16.22■□□□□ 0.19
RXRB-202ENST00000374685 PROK2Q9HC23 129 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 CYB5R1Q9UHQ9 305 aa16.22■□□□□ 0.19
RXRB-202ENST00000374685 HTR2CP28335 458 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 GLT8D1Q68CQ7 371 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 FADS6Q8N9I5 356 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 COA4Q9NYJ1 87 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 SCP2D1Q9UJQ7 156 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 TCFL5Q9UL49 500 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 GGT3PA6NGU5 568 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 GLSO94925 669 aaPredicted RBP16.21■□□□□ 0.19
RXRB-202ENST00000374685 ANXA7P20073 488 aaKnown RBP16.21■□□□□ 0.19
RXRB-202ENST00000374685 STARP49675 285 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 Q0VFX4 171 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 LINC00303Q3SY05 128 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 THEM4Q5T1C6 240 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 FDX2Q6P4F2 183 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 ABHD12BQ7Z5M8 362 aaPredicted RBP16.21■□□□□ 0.19
RXRB-202ENST00000374685 ACBD4Q8NC06 268 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 CT55Q8WUE5 264 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 RNF133Q8WVZ7 376 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 RBM24Q9BX46 236 aaKnown RBP16.21■□□□□ 0.19
RXRB-202ENST00000374685 PBOV1Q9GZY1 135 aa16.21■□□□□ 0.19
RXRB-202ENST00000374685 M0R296 226 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 ACOT7O00154 380 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 SLC17A2O00624 439 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 GSTZ1O43708 216 aaPredicted RBP16.2■□□□□ 0.18
RXRB-202ENST00000374685 APOC1P02654 83 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 CSN2P05814 226 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 FGF2P09038 288 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 EIF1P41567 113 aaKnown RBP16.2■□□□□ 0.18
RXRB-202ENST00000374685 SLC25A53Q5H9E4 307 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 OR14L1PQ8NHC6 308 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 ADAT3Q96EY9 351 aaPredicted RBP16.2■□□□□ 0.18
RXRB-202ENST00000374685 OXGR1Q96P68 337 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 DLL4Q9NR61 685 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 ETV7Q9Y603 341 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 CFAP47Q6ZTR5 3102 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 IGLV3-32A0A0A0MS00 114 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 A0A1W2PNV4 684 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 RBBP9O75884 186 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 TTRP02766 147 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 LIFP15018 202 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 RPL35P42766 123 aaKnown RBP16.2■□□□□ 0.18
RXRB-202ENST00000374685 GSG1Q2KHT4 349 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 FAM209BQ5JX69 171 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 RNF144BQ7Z419 303 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 PPP1R32Q7Z5V6 425 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 OR6S1Q8NH40 331 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 DNAJC13O75165 2243 aa16.2■□□□□ 0.18
RXRB-202ENST00000374685 LOC100289279A0A1B0GTE1 492 aa16.19■□□□□ 0.18
RXRB-202ENST00000374685 NPIPA2E9PIF3 369 aa16.19■□□□□ 0.18
RXRB-202ENST00000374685 NPIPA3F8WFD2 350 aa16.19■□□□□ 0.18
RXRB-202ENST00000374685 CTDSPLO15194 276 aa16.19■□□□□ 0.18
RXRB-202ENST00000374685 ZIC3O60481 467 aa16.19■□□□□ 0.18
RXRB-202ENST00000374685 GTF2F2P13984 249 aa16.19■□□□□ 0.18
RXRB-202ENST00000374685 ABOP16442 354 aa16.19■□□□□ 0.18
RXRB-202ENST00000374685 PLXDC2Q6UX71 529 aa16.19■□□□□ 0.18
RXRB-202ENST00000374685 NAA40Q86UY6 237 aa16.19■□□□□ 0.18
RXRB-202ENST00000374685 OR4D6Q8NGJ1 314 aa16.19■□□□□ 0.18
RXRB-202ENST00000374685 DOCK10Q96BY6 2186 aa16.19■□□□□ 0.18
RXRB-202ENST00000374685 F5H5K5 113 aa16.19■□□□□ 0.18
RXRB-202ENST00000374685 XRCC3O43542 346 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms