RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 CCDC157Q569K6 752 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 AWAT1Q58HT5 328 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF468Q5VIY5 522 aaPredicted RBP4.84□□□□□ -1.63
ATG4A-204ENST00000372246 PRAMEF8Q5VWM4 474 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 PRAMEF7Q5VXH5 474 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF425Q6IV72 752 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 VITQ6UXI7 678 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 COX15Q7KZN9 410 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 LYG2Q86SG7 212 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 CDC20BQ86Y33 519 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF584Q8IVC4 421 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 CARFQ8N187 725 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 C17orf78Q8N4C9 275 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF615Q8N8J6 731 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 DMBX1Q8NFW5 382 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 SLC2A12Q8TD20 617 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 TCEAL3Q969E4 200 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 TAAR8Q969N4 342 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 MCHR2Q969V1 340 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 MEGF10Q96KG7 1140 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 C4orf45Q96LM5 186 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 OR2A5Q96R48 311 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 MDFIQ99750 246 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 RPP25Q9BUL9 199 aaKnown RBP4.84□□□□□ -1.63
ATG4A-204ENST00000372246 TGIF2Q9GZN2 237 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF275Q9NSD4 429 aaPredicted RBP4.84□□□□□ -1.63
ATG4A-204ENST00000372246 GDE1Q9NZC3 331 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 PCNX3Q9H6A9 2034 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 THSD7BQ9C0I4 1608 aa4.84□□□□□ -1.63
ATG4A-204ENST00000372246 ARGFXA6NJG6 315 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 C1orf196B1AJZ1 125 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 SLC17A2O00624 439 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 ADAM10O14672 748 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 B3GALT2O43825 422 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 SLC16A7O60669 478 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF217O75362 1048 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 KNG1P01042 644 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 S100A9P06702 114 aaKnown RBP4.84□□□□□ -1.64
ATG4A-204ENST00000372246 CRHP06850 196 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 SLC35G6P0C7Q6 338 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 CSF2RAP15509 400 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 GLRA1P23415 457 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 PSMB6P28072 239 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 AGTR1P30556 359 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 GPX4P36969 197 aaPredicted RBP4.84□□□□□ -1.64
ATG4A-204ENST00000372246 PCP4P48539 62 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 RNF4P78317 190 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 TLE1Q04724 770 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 SPEM2Q0P670 501 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 PJVKQ0ZLH3 352 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 ILF3Q12906 894 aaKnown RBP eCLIP4.84□□□□□ -1.64
ATG4A-204ENST00000372246 UNC119Q13432 240 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 MEF2DQ14814 521 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 MPPED2Q15777 294 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 C21orf62-AS1Q17RA5 79 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 RNASE10Q5GAN6 216 aaKnown RBP4.84□□□□□ -1.64
ATG4A-204ENST00000372246 AGBL4Q5VU57 503 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 ULK3Q6PHR2 472 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 LILRA6Q6PI73 481 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 SLC16A9Q7RTY1 509 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 GKN2Q86XP6 184 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 EXD3Q8N9H8 876 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 OR52N4Q8NGI2 321 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 OR5D18Q8NGL1 313 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 OR14C36Q8NHC7 312 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 IFI44Q8TCB0 444 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 NPRL2Q8WTW4 380 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 ASB5Q8WWX0 329 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 ANKRD9Q96BM1 317 aaPredicted RBP4.84□□□□□ -1.64
ATG4A-204ENST00000372246 HHIPL1Q96JK4 782 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 INTS14Q96SY0 518 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 PFDN5Q99471 154 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 PIGQQ9BRB3 760 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF251Q9BRH9 671 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 MESP1Q9BRJ9 268 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 TRIM2Q9C040 744 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 COMMD4Q9H0A8 199 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF700Q9H0M5 742 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 PCBD2Q9H0N5 130 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 SRMSQ9H3Y6 488 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 CNTD2Q9H8S5 307 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 FAM60AQ9NP50 221 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 GRHPRQ9UBQ7 328 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 CARHSP1Q9Y2V2 147 aaKnown RBP4.84□□□□□ -1.64
ATG4A-204ENST00000372246 FBXO7Q9Y3I1 522 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 HEBP2Q9Y5Z4 205 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 COLEC10Q9Y6Z7 277 aa4.84□□□□□ -1.64
ATG4A-204ENST00000372246 ARHGEF17Q96PE2 2063 aaPredicted RBP4.83□□□□□ -1.64
ATG4A-204ENST00000372246 LOC400499M0QZD8 3231 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 A0A087WUJ7 227 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 IGKV1D-43A0A0B4J1Z2 117 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 C7orf77A4D0Y5 90 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 H7C1Q1 480 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 CYR61O00622 381 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 MBTPS2O43462 519 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 TNFSF12O43508 249 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 FOXS1O43638 330 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 CDC40O60508 579 aaKnown RBP eCLIP4.83□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF354AO60765 605 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms