RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 KIR3DX1Q9H7L2 352 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 FGF22Q9HCT0 170 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 NGBQ9NPG2 151 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 NECAP2Q9NVZ3 263 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR52A1Q9UKL2 312 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 ARAP2Q8WZ64 1704 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 A0A1B0GX78 115 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 M0QYG6 137 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 HLXQ14774 488 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 TMEM196Q5HYL7 178 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 SPRED1Q7Z699 444 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 C10orf126Q8N4M7 172 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 EIF4E3Q8N5X7 224 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 NUP37Q8NFH4 326 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR6K3Q8NGY3 331 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 CLMPQ9H6B4 373 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 NOX4Q9NPH5 578 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 RPL12P30050 165 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 CPOXP36551 454 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 HERVK_113P61574 105 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 CBLL1Q75N03 491 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR8B4Q96RC9 309 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 PMP2P02689 132 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 SGK494Q96LW2 274 aa12.83□□□□□ -0.36
RAPGEF1-202ENST00000372190 C7orf72A4D263 438 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 KLRC4-KLRK1H3BQV0 150 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 ADH4P08319 380 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 CLEC2LP0C7M8 214 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 COX5AP20674 150 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 KCNJ3P48549 501 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 HBA1P69905 142 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 ASTLQ6HA08 431 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 SDR9C7Q8NEX9 313 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 KCNG3Q8TAE7 436 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 ACPTQ9BZG2 426 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 IER3IP1Q9Y5U9 82 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 CRXO43186 299 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 FBP1P09467 338 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 RRASP10301 218 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 CD1BP29016 333 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 PIGPP57054 158 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 CSNK1G2P78368 415 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 THOC3Q96J01 351 aaKnown RBP12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 CITED1Q99966 193 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 RSRP1Q9BUV0 290 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 SEC11CQ9BY50 192 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 NSG2Q9Y328 171 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 COL5A3P25940 1745 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 TSPAN13O95857 204 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 SULT1A1P50225 295 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 SYT6Q5T7P8 510 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 ANGPTL5Q86XS5 388 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 SLC39A7Q92504 469 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 SLC46A1Q96NT5 459 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 MENTQ9BUN1 341 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 MCRIP1C9JLW8 97 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 PYCR3Q53H96 274 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 ZNF626Q68DY1 528 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 PRSS3P2Q8NHM4 247 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 MMP24Q9Y5R2 645 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 CITO14578 2027 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 TMEM212A6NML5 194 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 MPLP40238 635 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 KIRREL1Q96J84 757 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 MAP1LC3CQ9BXW4 147 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 PLA2G2FQ9BZM2 168 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 AMBRA1Q9C0C7 1298 aa12.82□□□□□ -0.36
RAPGEF1-202ENST00000372190 K7ESM1 405 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 NXPH3O95157 252 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 OPN1LWP04000 364 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 SMIM17P0DL12 118 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 EDN3P14138 238 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 EXT1Q16394 746 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 PIP5KL1Q5T9C9 394 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR5M10Q6IEU7 315 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 SLC16A12Q6ZSM3 486 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 DND1Q8IYX4 353 aaKnown RBP12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 PRSS35Q8N3Z0 413 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 LKAAEAR1Q8TD35 194 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 RAB37Q96AX2 223 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 MUCL1Q96DR8 90 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 SLC35E1Q96K37 410 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 IL21Q9HBE4 155 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 A0A087WV62 115 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 LOC102725191A0A1B0GVB3 256 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 TMEM202A6NGA9 273 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 CNN1P51911 297 aaKnown RBP12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 PDE7AQ13946 482 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR4C16Q8NGL9 310 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 PDLIM5Q96HC4 596 aaKnown RBP12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 TRAPPC2LQ9UL33 140 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 C4orf47A7E2U8 309 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 METTL12A8MUP2 240 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 TNFSF4P23510 183 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR3A1P47881 315 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 SRSF9Q13242 221 aaKnown RBP eCLIP12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 PRAMEF20Q5VT98 475 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 C5orf46Q6UWT4 87 aa12.81□□□□□ -0.36
RAPGEF1-202ENST00000372190 DTWD2Q8NBA8 298 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms